Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01403 ATGGTGGGTGATTGTGATTGTGATTGTGATCGGCATTTTGGTCACAAAGCAATCACTCCTCCTTTTTGTTATGCATGGGGAACCTTTCTGTTCCTCCTCATAACCCCTCTTGCAAATGCTCACCAACTTTCTTTTGATTACAACTTCACTGATTCTGCTGATGTAAAACAGCTAATCCTGCAAGGAAATTTTTCTGCTTCAAGTAGCGGCATTTACCTCGCAGCTGATCCAAACGGGAATGGGAGTGTTGGGAGAGTCACAAGTCCCCAACTTCTTCATCTTTGGAACAGAAGCTCAAATGAACTTAAAAAATTCACTACCCACTTTTCCTTTACGGTTTTCACAAACCAGCTTCCTGGTGGAGACGGTTTCACCTTCTTCCTAGCAAACCCGAATCTCCCAGATGTGAATGCCACAGATGAGATACAAGGAGGAGGCATTGGCATTGGCCGTGTGGATAACGTTAGACTTAGAGCTCTCCCAAATGAGTATCATTTTGTGGCGGTGGAATTTGACACTTTCTCAAACCATTGGGACCCAGACTACCCGCATGTGGGTGTGAATGTTAACTCTATGGAGTCTGAAATAGTTGAGAAATGGGGGACAGGTGTTTCTTCAAGACTCCCTTATGATTGCAGTATTGAATACAACTCGCAAGATTATTTACTAAACGTTTCTTTCACTGGATACATATTCAGTGGAGAACACGTAAATGTTGTAAGACAGTACCTTGGTTACCACATTGATTTGAGTCATTACTTACAAGAGTGGGTTATTGTAGGTATATCAGCTGCCACGGCAGCTTTGTCTGAGGAACATTGCCTTCTGTCGTGGTCATTTAATAAAAAAACACCAAGTAACGATCATCATAAGAAGAGAAGCGAGTTAATCAACAAAAAGTTGTTGGTGGGAGTAGGAATTGGTTTTGGATGGTGTGTGACTTTGTTTTTGTTGATCTACTTTTTATTgaggaagaggaagaaaggaaatgagagagaggaagaAGCCACTTCAGAAACCGCTTCTGATTTGAAGATGGATGATGAGTTCCTAATGGGCATTGGACCTAAGAAGATCAGCTACAAGGAATTGGTATCTGCAACAAACAACTTTGAAAAGACACTGAAGCTGGGGCAAGGTGGTTTTGGATGTGTTTATAAAGGTTATTTCAAAGACATGGACTCCTATGCTGCTATGAAGAGGATATCAGTAGATTCAACACAGGGTGTGAAGGAGTACACAACTGAAGTGATGATCATTAGCCAATTGAGGCACAGGAATTTGGTGAAACTCATTGGTTGGTGCCACAAGAAGAATGATCTGTTTTTGATATATGAGTACATGCCAAATGGAAGCTTAGGTTCTTGTCTTTTTGGTGGAGAAAAGTTGTTGTCATGGAAAGTCAGGTACAATGTGGCTCTGGACTTGGCATCAGCATTGCTTTACCTTCAGGAAGAATGGGAAAAATGTGTGATTCATAGGGACATTAAATCAAGCAACATAATGTTGGACTCCAATTTCAATGCTAAGCTTGGGGATTTTGGCCTGGCTAGGCTGGTGGACCATGAGAAAGGGTCACATACCACGGTTATGGAAGGCAGAATTGGTTACCTTGCCCCTGAATATATGACCACAGGCAAGGCTGGAAAGGAATCTGACATATTCAGTTTTGGGGTTGTTTGTTGGGAGTTAGCCACTGGAAGAAAAGCCATTCACCACAAAGACATGGAGGGTCAAGTATCATTAGTTGAGTGGGTGTGGAAGCTTTATGGATTGAGAAATCTCCTTTCAGCAGCAGATCCATACCTATATGGGGAATTTGATGAGCCGCAAATGGAATGCTTACTGGCTGTTGGTCTTTGGTGTGCTAATCCAAATAGCAAAGCAAGACCCTCAATAAAACAAGTGGTTAAGAGTTCATATGGTTATAGTGATCATGGTTTGGCATTCTACCTAGCAAAACCAAATCTCCCAAATGCAAATGACACTGTAGAACTACATGGAGTAGGCCTTAGCCCTGGATCAGCTACAGCCTACAAGGAATTGGTATCTGCAACAAACAACTTCGGAGAGACACAGAAGCTGGGGCAAGGTGGTTTTGGTAGTGTTTACAAAGGCTATTTCAAAGGTTCAAATTCCTATGCTGCTATAAAGAAGATATCAGCAGGTTCAACACAGGGTGTGAAGGAATACGCAGCAGAAGTTACGATCATTAGCCAGTTGAGGCACAAGAATTTGGTGAAACTCACCGGCTGGTGCCACAAGAAGAATGATCTCTTCCTCATATACGAGTACATGCCAAATGGAAGCTTAGATTCTCATATTTTTTGTGGAGAAAGAGAAAGTTTCTTGTCGTGGCATGTGAGGTACAACATAGCTCTAGGCTTGGCCTCATCATTGTTTTACCTACAAGAAGAGTGTGAAAAACGTGTGCTTCATAGGGACTTCAAATCAAGCAACATATTGTTGGACTGA 2475 0.4141 MVGDCDCDCDRHFGHKAITPPFCYAWGTFLFLLITPLANAHQLSFDYNFTDSADVKQLILQGNFSASSSGIYLAADPNGNGSVGRVTSPQLLHLWNRSSNELKKFTTHFSFTVFTNQLPGGDGFTFFLANPNLPDVNATDEIQGGGIGIGRVDNVRLRALPNEYHFVAVEFDTFSNHWDPDYPHVGVNVNSMESEIVEKWGTGVSSRLPYDCSIEYNSQDYLLNVSFTGYIFSGEHVNVVRQYLGYHIDLSHYLQEWVIVGISAATAALSEEHCLLSWSFNKKTPSNDHHKKRSELINKKLLVGVGIGFGWCVTLFLLIYFLLRKRKKGNEREEEATSETASDLKMDDEFLMGIGPKKISYKELVSATNNFEKTLKLGQGGFGCVYKGYFKDMDSYAAMKRISVDSTQGVKEYTTEVMIISQLRHRNLVKLIGWCHKKNDLFLIYEYMPNGSLGSCLFGGEKLLSWKVRYNVALDLASALLYLQEEWEKCVIHRDIKSSNIMLDSNFNAKLGDFGLARLVDHEKGSHTTVMEGRIGYLAPEYMTTGKAGKESDIFSFGVVCWELATGRKAIHHKDMEGQVSLVEWVWKLYGLRNLLSAADPYLYGEFDEPQMECLLAVGLWCANPNSKARPSIKQVVKSSYGYSDHGLAFYLAKPNLPNANDTVELHGVGLSPGSATAYKELVSATNNFGETQKLGQGGFGSVYKGYFKGSNSYAAIKKISAGSTQGVKEYAAEVTIISQLRHKNLVKLTGWCHKKNDLFLIYEYMPNGSLDSHIFCGERESFLSWHVRYNIALGLASSLFYLQEECEKRVLHRDFKSSNILLD 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01403 824 ProSitePatterns Legume lectins beta-chain signature. 167 173 IPR019825 -
Cca09g01403 824 CDD lectin_legume_LecRK_Arcelin_ConA 43 281 IPR001220 GO:0030246
Cca09g01403 824 ProSiteProfiles Protein kinase domain profile. 371 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g01403 824 PANTHER - 677 824 - -
Cca09g01403 824 ProSitePatterns Protein kinases ATP-binding region signature. 695 719 IPR017441 GO:0005524
Cca09g01403 824 SMART serkin_6 371 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g01403 824 Gene3D Transferase(Phosphotransferase) domain 1 448 645 - -
Cca09g01403 824 ProSitePatterns Protein kinases ATP-binding region signature. 377 400 IPR017441 GO:0005524
Cca09g01403 824 CDD STKc_IRAK 377 638 - -
Cca09g01403 824 Gene3D Transferase(Phosphotransferase) domain 1 766 824 - -
Cca09g01403 824 PANTHER - 75 638 - -
Cca09g01403 824 PANTHER LECTIN RECEPTOR KINASE 677 824 - -
Cca09g01403 824 Gene3D Phosphorylase Kinase; domain 1 356 447 - -
Cca09g01403 824 Gene3D Phosphorylase Kinase; domain 1 675 765 - -
Cca09g01403 824 SUPERFAMILY Protein kinase-like (PK-like) 350 640 IPR011009 -
Cca09g01403 824 ProSitePatterns Serine/Threonine protein kinases active-site signature. 811 823 IPR008271 GO:0004672|GO:0006468
Cca09g01403 824 ProSiteProfiles Protein kinase domain profile. 689 824 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g01403 824 SUPERFAMILY Protein kinase-like (PK-like) 673 824 IPR011009 -
Cca09g01403 824 PANTHER LECTIN RECEPTOR KINASE 75 638 - -
Cca09g01403 824 Gene3D - 41 302 - -
Cca09g01403 824 SUPERFAMILY Concanavalin A-like lectins/glucanases 43 283 IPR013320 -
Cca09g01403 824 Pfam Legume lectin domain 43 292 IPR001220 GO:0030246
Cca09g01403 824 Pfam Protein kinase domain 372 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g01403 824 Pfam Protein kinase domain 691 824 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g01403 824 ProSitePatterns Serine/Threonine protein kinases active-site signature. 491 503 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01403 Cca-Chr9 37334497 37338562 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01403 656 824 Receptor kinase-like Gene Family AT5G10530 53.254 6.31e-50 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Cca09g01403 Pkinase 1.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01403 - - cam:101492002 702.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01403 09 37334497 37338562 Cca09g01403 09 37334497 37338562 ECH