Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca09g01402 | ATGGCTGGTTGTGGATGGCAGTTTGGTCTGCTGTTCAGGACAACCATTTTATTCATCCTAATAATCCCCATTGCAAATGCTCAGCCTCAGTCTTTTCACTACCCCTACTTTAACTCAACTTATGTTAAGCAGCTCAATCTGGAAGGTAATGCTTCTTCCTCAGGTTCTGCTATCCAACTCACAGTGAATGCAATGAACCCAAACAACAAGTTTGGGACAGTGGGGCGTGTCACGTATCCCAAGCTAATAAATCTTTGGGACAAAAGTTCAAATGAAGTAAAAGACTTCACCACTAACTTTTCCTTTGTTGTTTCCTCAAATAAGAGTCCTTATGGAGATGGTTTAGCATTCTTCCTTGCAAGTCCAAATCTGGTAATCATAAGTGATATATTACTAATGGGAGGAAGCCTTGGCATTGGCCTTGTGGATGATAAGATAAATAGCCTCTCACCAGATTATAAATATGTGGCAGTGGAGTTTGACACTTACTCAAACACATGGGATCCAGATGGTGCACATGTAGGTGTAAATATCAACACTATGAAGTCTGAAATGTATGAGAAATGGTCGACAAATATTACACAAGGGGAAGTTTGTAACTGTAGTATTGTATACAATTCCAGAAGCAATATTTTGAACGTTTATTACACTGGATACAATTTCCGTGATGGGCATGCAACACAGGTTACACGCCAACTTTCACACCACGTTGATATCACACAGATATTACCTGAGTCTGTTGTTGTTGGCATATCAGCTGCAACAGGAGATTATGCTGAGGAACATACCCTGCTGTCATGGTCATTTAGTACAAGTACAAGTGAGGTCGATCGAGTGAAGGAATGCTGGTTACTCAGCAAAAGAATGTTGGAGGGAATAGGAATTGGAACCGGTTTGTTTTTTAGTTTGTTTGGGATGATTCACATTTTATTAAGGAGGCTGACCAAAGGAAAAGAAGAAGATTGCATTTCAGAAGCCACTTCTGATCTGAAGATGGATCATGTATTCGTGGACACTGGGCCTAAGAAGATTAGTTATCATGAATTGGTAAGTGCAACCAACAATTTTGATGAGACACAGAAGCTAGGCCAAGGAGGTTTTGGTGGTGTTTATAGAGGTTATTTCAAAGACTCAAACACCTATGCTGCTATAAAGAGGATATCAGCAGGTTCCAAGCAGGGTATAAAACAATACACAGCAGAAGTGAAGATCATTAGCCAATTGAGGCACAGGAATTTGGTAAAACTCACCGGTTGGTTCCATAAGAAGAAAGATCTCATCCTGGTATACGAGTACATGGAAAATGGCAGCTTGGATCATCACCTTTTTCGTGGTGAAATCATCTTGTTATGGAAGGTGAGGTACAACATAGCTCTGGGCTTGGCCTCAGCATTGCTTTACCTACAAGAAGAATGGGAAAAATGTGTGCTTCACAGGGACATTAAATCAAGCAACATAATGTTGGACTCCAACTTCAACCCTAAGCTTGGGGATTTTGGCCTGGCTAGGCTGGTGGATCATGAGAAAGGGTCACCAACCACAGATGTGGCAGGGAACATGGGTTACCTTGCCCCTGAATATATGAACACGGGCAAGGCGAGAAAGGAATCAGACATATTCAGTTTTGGGGTTGTTCTGTTGGAGATAGCCACTGGAAGAAAAGCCATTCACCACAAAGACATGGAGGGTGAAGTGTCATTAGTTGAGTGGGTGTGGGAGCTCTATGGTTTGAGCAATGTGCTTGCCACAGCAGATCCAAACCTATGTGGGGAATTTGATGTGCAGCAAATGGAATGCTTGCTGGTTGTTGGTCTATGGTGTGCAAATCCAGATTCAGCATCCAGACCCTCTATAAGGCAAGTTATTAAAGTTCTTAACTTTGAAGCTCCTTTACCAATTCTCCCACAACAGATTCCAATGCAAGATTTTCTCTGTCCCATGACAAATGAGTTGTTTCTTACAGTTTCATCTTCCTCAAAGGCTACAAGTTAA | 1992 | 0.4167 | MAGCGWQFGLLFRTTILFILIIPIANAQPQSFHYPYFNSTYVKQLNLEGNASSSGSAIQLTVNAMNPNNKFGTVGRVTYPKLINLWDKSSNEVKDFTTNFSFVVSSNKSPYGDGLAFFLASPNLVIISDILLMGGSLGIGLVDDKINSLSPDYKYVAVEFDTYSNTWDPDGAHVGVNINTMKSEMYEKWSTNITQGEVCNCSIVYNSRSNILNVYYTGYNFRDGHATQVTRQLSHHVDITQILPESVVVGISAATGDYAEEHTLLSWSFSTSTSEVDRVKECWLLSKRMLEGIGIGTGLFFSLFGMIHILLRRLTKGKEEDCISEATSDLKMDHVFVDTGPKKISYHELVSATNNFDETQKLGQGGFGGVYRGYFKDSNTYAAIKRISAGSKQGIKQYTAEVKIISQLRHRNLVKLTGWFHKKKDLILVYEYMENGSLDHHLFRGEIILLWKVRYNIALGLASALLYLQEEWEKCVLHRDIKSSNIMLDSNFNPKLGDFGLARLVDHEKGSPTTDVAGNMGYLAPEYMNTGKARKESDIFSFGVVLLEIATGRKAIHHKDMEGEVSLVEWVWELYGLSNVLATADPNLCGEFDVQQMECLLVVGLWCANPDSASRPSIRQVIKVLNFEAPLPILPQQIPMQDFLCPMTNELFLTVSSSSKATS | 663 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca09g01402 | 663 | ProSitePatterns | Protein kinases ATP-binding region signature. | 362 | 385 | IPR017441 | GO:0005524 | |
Cca09g01402 | 663 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 476 | 488 | IPR008271 | GO:0004672|GO:0006468 | |
Cca09g01402 | 663 | SMART | serkin_6 | 356 | 625 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca09g01402 | 663 | PANTHER | - | 16 | 662 | - | - | |
Cca09g01402 | 663 | CDD | STKc_IRAK | 362 | 626 | - | - | |
Cca09g01402 | 663 | Gene3D | Transferase(Phosphotransferase) domain 1 | 433 | 643 | - | - | |
Cca09g01402 | 663 | ProSitePatterns | Legume lectins beta-chain signature. | 156 | 162 | IPR019825 | - | |
Cca09g01402 | 663 | SUPERFAMILY | Protein kinase-like (PK-like) | 340 | 646 | IPR011009 | - | |
Cca09g01402 | 663 | Gene3D | - | 29 | 284 | - | - | |
Cca09g01402 | 663 | Pfam | Legume lectin domain | 30 | 274 | IPR001220 | GO:0030246 | |
Cca09g01402 | 663 | ProSiteProfiles | Protein kinase domain profile. | 356 | 634 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca09g01402 | 663 | PANTHER | LECTIN RECEPTOR KINASE | 16 | 662 | - | - | |
Cca09g01402 | 663 | Pfam | Protein kinase domain | 357 | 623 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca09g01402 | 663 | Gene3D | Phosphorylase Kinase; domain 1 | 341 | 432 | - | - | |
Cca09g01402 | 663 | CDD | lectin_legume_LecRK_Arcelin_ConA | 31 | 272 | IPR001220 | GO:0030246 | |
Cca09g01402 | 663 | SUPERFAMILY | Concanavalin A-like lectins/glucanases | 29 | 273 | IPR013320 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca09g01402 | Cca-Chr9 | 37329311 | 37331302 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca09g01402 | 18 | 643 | Receptor kinase-like Gene Family | AT5G10530 | 43.281 | 7.96e-167 | 491 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_L-LEC | Cca09g01402 | Pkinase | 7.1e-48 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca09g01402 | - | - | cam:101492002 | 749.969 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Cca09g01402 | 09 | 37329311 | 37331302 | Cca09g01402 | 09 | 37329311 | 37331302 | ECH | |
Cca08g02626 | 08 | 60699697 | 60701709 | Cca09g01402 | 09 | 37329311 | 37331302 | PCT |