Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01390 ATGACCTCTACCACTATGTTGGAGTCTTTAGCTTGGTGTCAAAGCTTTAAGGGATATGACCTTACCAAACAAAAGAGTCCGGGTTACACTCATGCTATTTCACGAGTTTATAGAAGTTCTGCTTTCATGCTTTATTCAGTTAACAAGCAAGTGCCACTACTACCACGCGGTGCAAGTCATGGGATAATTTATAGGACTTCTGTTTCAGAAAACTTCTTTAAAAGGTCTCCTCTCAATGTTCCATCATGGAAAGGATTGTATAGGCCGCGTTGGGAACGGCTGCGAACAAATGTAGCATATGATGTTGCTGGTGCTGTTGACGTCATCAATGATTTAGGATTGGATACTCTTACTTTCTTGGCTGTGACCGTCATAATTGTGCCTACATTCAAGTCACTTAAAGCCAGTCCTATACTTGGTTTCTTCTGTGCTGGTGTGGTACTCAATCAGTTTGGTTTAATTAGAAACATTACAGATGTTAAAGTTTTATCAGAATGGGGGATCCTTTTCTTGCTGTTTGAGATGGGTTTAGAGCTTTCACTTGCACGATTGAAAGCTCTTGCAAAATATGCTTTTGGGATGGGATTGGCTCAGGTTGTACTGTCCACTTTAGCATTTACTGCTTTTGAACTTCCTCCAAATGGAGCCGTCGGAACAAAAATTTTGGAATTTCTTTTCCACTCTAGGCCTGATCTGGTGAACATCAGAAGTATCGATGAAGCCGTAGTGATTGGTGCTGCTCTCTCTCTTTCATCTTCTGCGTTTGTTCTACAGCTTCTTGCAGAGAAAGGTGAACTTCCCACAAGATTTGGTTCAGCAACTCTTGGAATACTTCTTTTGCAGGACTTAGCCGTTGTCCCTCTTTTAGTCATACTTCCCATACTAGAGAGCCAGAATATATCTGAGGAAAGTATTTGGCCCATGCTTGCTCAAGAAAGTTTAAAGGCATTAGGTGGATTGGGTCTGCTTTCTCTTGGGGCAAAGTACATTCTCAGACGAGTTTTTGAGGTTGTAGCAGATACAAGGAGCTCAGAGGCTTTTGTTGCTCTTTGCTTGCTGACTATTGCTGGGACTTCACTAGTCACACAGAATTTGGGCTTCAGTGATACGCTTGGAGCTTTTTTAGCTGGGGCAATTTTAGCAGAGACAAATTTCAGGACCCAGATTGAAGCTGACATAAGACCATTTAGAGGCTTGTTGCTTGGGTTGTTTTTCCTAACTACGGGAACTTCAATTGACATGCAGCTCCTTTTGCGAGAGTGGCCAAATGTACTTTCACTTTTGGGAGGTTTAATTGCCATAAAAACATTGATCATAACTGCAATTGGTCCTCGTGTTGGGCTTACTCTACAAGAAAGTGTAAGAATAGGATTGCTTCTATCCCAAGGAGGCGAGTTTGGATTTGTTGTTTTCTCTTTAGCAAATAGGCTTGGGGTGCTTCCTCTTGAGCTCAACAAGCTGCTCATAATTGTTGTTGTATTGTCAATGGCATTAACCCCATTTCTGAATGAAGCTGGAAGAAGGGCTGCTAATTTTATTGAAGAAAAATCTGCTCCCGAGAATAAAGCTTCTGAGATGGTTGACTTCAATGCTAGAGAACCTGTTGTTATCCTTGGATTTGGACAAATGGGCCAGGTCCTTGCCAATTTCCTCTCCAATCCATTGGCTTCAAGAGGAGATGGTGATTTAGTAGGATGGCCTTATGTGGCATTTGATCTTGACCCCACAGTAGTAAAGGCAGCTAGTAAACTTGGTTTTCCAATTCAATATGGGGATGGATCGCGTCCAGATGTTCTTCATTCTGCTGGTGTCCATTCTCCCAAAGCTATCATGTTAATGTACACCGGGAAGAAGAAGACAATTGAAGCTGTTCAGAGGCTAAGAATGAGTTTTCCTTCAATCCCAATCTATGCTCGAGCTCGAGATCTGAAGCATCTTTTAGATCTGAAGAAAGCAGGTGCAACGGATGCCATTTTGGAAAATGCAGAGACTAGTTTGCACCTGGGTTCTAAGCTGCTGAAAGGCCTTGGTGTGATGTCTGATGATGTAGCATTTTTGAGTCAGCTTATTAGAGATTCCATGGAGCTACAAGCTCAAGAAGCAATTAGCCAATCTGAATATCGTGAATTAGATATTATGAAACCTCTTCAGGTGAAAGTTACTGAAAAGGAGGAACGTGTAGCAGTGACAACAACTTCACAAGAATCTGAATTATCAGAAATGAATCAGAAAGATCAAGCTTCATTGGTTATAAATCAGAGGGAAGTAGATACAGAAGAACAAGATTATAAACTAAATGAAGCTGTGAATTTACAAGGAAATGGTGTTTTACTTAGCCAACAAAGTATTGAAGAAAGCTCAATGGTTGCATCTACAGATGCTCCTAGACAGAAGAATCTAGTAGACCCATCAATCCCATCTTCCCATACTGCCACTGAGGAACCCTAA 2448 0.4142 MTSTTMLESLAWCQSFKGYDLTKQKSPGYTHAISRVYRSSAFMLYSVNKQVPLLPRGASHGIIYRTSVSENFFKRSPLNVPSWKGLYRPRWERLRTNVAYDVAGAVDVINDLGLDTLTFLAVTVIIVPTFKSLKASPILGFFCAGVVLNQFGLIRNITDVKVLSEWGILFLLFEMGLELSLARLKALAKYAFGMGLAQVVLSTLAFTAFELPPNGAVGTKILEFLFHSRPDLVNIRSIDEAVVIGAALSLSSSAFVLQLLAEKGELPTRFGSATLGILLLQDLAVVPLLVILPILESQNISEESIWPMLAQESLKALGGLGLLSLGAKYILRRVFEVVADTRSSEAFVALCLLTIAGTSLVTQNLGFSDTLGAFLAGAILAETNFRTQIEADIRPFRGLLLGLFFLTTGTSIDMQLLLREWPNVLSLLGGLIAIKTLIITAIGPRVGLTLQESVRIGLLLSQGGEFGFVVFSLANRLGVLPLELNKLLIIVVVLSMALTPFLNEAGRRAANFIEEKSAPENKASEMVDFNAREPVVILGFGQMGQVLANFLSNPLASRGDGDLVGWPYVAFDLDPTVVKAASKLGFPIQYGDGSRPDVLHSAGVHSPKAIMLMYTGKKKTIEAVQRLRMSFPSIPIYARARDLKHLLDLKKAGATDAILENAETSLHLGSKLLKGLGVMSDDVAFLSQLIRDSMELQAQEAISQSEYRELDIMKPLQVKVTEKEERVAVTTTSQESELSEMNQKDQASLVINQREVDTEEQDYKLNEAVNLQGNGVLLSQQSIEESSMVASTDAPRQKNLVDPSIPSSHTATEEP 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01390 815 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 533 677 IPR036291 -
Cca09g01390 815 MobiDBLite consensus disorder prediction 784 815 - -
Cca09g01390 815 Pfam TrkA-N domain 535 658 IPR003148 GO:0006813
Cca09g01390 815 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 89 755 - -
Cca09g01390 815 Pfam Sodium/hydrogen exchanger family 118 503 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Cca09g01390 815 Gene3D - 111 511 IPR038770 -
Cca09g01390 815 Gene3D - 534 704 - -
Cca09g01390 815 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 89 755 - -
Cca09g01390 815 ProSiteProfiles RCK N-terminal domain profile. 534 666 IPR003148 GO:0006813
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01390 Cca-Chr9 37140843 37152001 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01390 1 753 Inorganic Solute Cotransporters AT4G04850 69.744 0.0 1031
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01390 - - gmx:100798214 1341.25