Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01379 ATGGGTGAAGAACTTTCTGCTTTGGATATTGATCAGCTGAAGCATCTGGAAGATCAATTGGAAACGGGTTTGAAGAATGTTCGCACAAGAAAGGATCAAATGTTTATAGATGAGATCAAAGAATTACAACAAAAGGGAAGCCTCGTTCAGCAACAAAAGGAAGAACTTCTTAAAAAGATAGACCTTATCCACAAAGAAAATGCAGAACTAAAAAAGGTTGTTGAAGCAAGGCGTGCAGAAGAAAAAGAATCACTGAATCCTTCACATGCTATCAGCAATGGATATGATAAACTTTACCCTAACAGTCTGCAACAAAGCCAGTCTCAGCCTCAACACAGGGCACCATCGGATGAAGCGATCATTCTGGGGTATTCCCTCAAATTGAAGATATAA 393 0.3919 MGEELSALDIDQLKHLEDQLETGLKNVRTRKDQMFIDEIKELQQKGSLVQQQKEELLKKIDLIHKENAELKKVVEARRAEEKESLNPSHAISNGYDKLYPNSLQQSQSQPQHRAPSDEAIILGYSLKLKI 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01379 130 MobiDBLite consensus disorder prediction 86 114 - -
Cca09g01379 130 PANTHER SERUM RESPONSE FACTOR HOMOLOG 1 129 - -
Cca09g01379 130 PANTHER MADS-BOX TRANSCRIPTION FACTOR 1 129 - -
Cca09g01379 130 MobiDBLite consensus disorder prediction 79 116 - -
Cca09g01379 130 Coils Coil 39 83 - -
Cca09g01379 130 Pfam K-box region 1 60 IPR002487 GO:0003700|GO:0005634|GO:0006355
Cca09g01379 130 ProSiteProfiles K-box domain profile. 1 66 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01379 Cca-Chr9 37018524 37019586 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01379 1 128 MADS-box Gene Family AT2G14210 43.077 9.36e-25 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01379 K09264 - ccaj:109806906 249.21