Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01369 ATGTACAAGGCAACACTTCCCAACGGTTGGTTCTTCGCAGTTAAGAGACTCTATGATTCTGAGTATCTTATAAGAAGTTTCGAGTTAGAAATAATGATGGGGAGGTACAGTCACAGAAACATAGTGTCCCCGATCAGTTTCTGCATAGAGAAAGAAAGAAATGAAAGAATTTTGGTGTATCATTACATGCCAAATGGAAGTCTTTCTGATTGGTTGAATCATACGACAACATTAGGGTGGCATGTGGTTATTAGGATTGCATTGGGGGTTGCAAGAGGTTTATCTTGCCTTCATCATAGCTTACATATGGTTCATCTAAGTATTGCCCCCGAGAGTATTTTGTTAGGAAACAATTTTGAGCCAAGAATATCTAATTTTGGAAGTGCCATGTTCATGAACTATGATCTAGGCCAAAACGTTGGATTTGAGAAGAAGGATGTGTACGACTTTGGAACTTTGCTTTTTGAGGTTATTAGAGGGAAATCATTTGGCCAGACACGTAAATGTTTGGGCAATACTAATGATGGCCCTTTTGCGACTTACACTTATGCTACTAATCTGTTCGAGGACCCTTTTGGCTTCTATGATGTTATGGATAAATCTCTAAAGGAGATAGAGTTTGAAGATGAGGTTTCTGCTTTACTCAAAGTTGCATGTGACTGTGTTCATCCTTCTCCTTGTAAAAGGCCCACGATGCTTGAAGTATACAGCAAGATGAGCAACATATGGGAGAGAGATGGCATTTTTGAAGATTCTTTGATGCCCTAG 768 0.3932 MYKATLPNGWFFAVKRLYDSEYLIRSFELEIMMGRYSHRNIVSPISFCIEKERNERILVYHYMPNGSLSDWLNHTTTLGWHVVIRIALGVARGLSCLHHSLHMVHLSIAPESILLGNNFEPRISNFGSAMFMNYDLGQNVGFEKKDVYDFGTLLFEVIRGKSFGQTRKCLGNTNDGPFATYTYATNLFEDPFGFYDVMDKSLKEIEFEDEVSALLKVACDCVHPSPCKRPTMLEVYSKMSNIWERDGIFEDSLMP 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01369 255 Gene3D Phosphorylase Kinase; domain 1 1 62 - -
Cca09g01369 255 Pfam Protein tyrosine and serine/threonine kinase 28 130 IPR001245 GO:0004672|GO:0006468
Cca09g01369 255 Gene3D Transferase(Phosphotransferase) domain 1 63 137 - -
Cca09g01369 255 Gene3D Transferase(Phosphotransferase) domain 1 138 248 - -
Cca09g01369 255 SUPERFAMILY Protein kinase-like (PK-like) 2 237 IPR011009 -
Cca09g01369 255 ProSiteProfiles Protein kinase domain profile. 1 244 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g01369 255 PANTHER SERINE/THREONINE-PROTEIN KINASE BRI1-LIKE 1 1 249 - -
Cca09g01369 255 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 1 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01369 Cca-Chr9 36890307 36891074 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01369 1 242 Receptor kinase-like Gene Family AT5G07280 32.000 2.92e-32 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Cca09g01369 PK_Tyr_Ser-Thr 1.8e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01369 - - gmx:102663800 442.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01369 09 36890307 36891074 Cca08g02589 08 60244939 60247361 PCT