Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca09g01362 | ATGAAACGGCCTACTTTGACTCTGATAGTAGGACTTTGCTTAGGCTTTGTGACTGGGGTGGGTTTGGCAATTTCGATTGCAGTATGTGTCATATGTGGAAGGAAGCGCACAAAGGTTGGGAGGAGCAGTTCTCAGAATGCAGTGACCGTTCCTGTTAATGCCATAGCGGTTGATTCTCACTCAACATTATCGGACGGCCTGGAGTCTCCCAGAACATCTGAGTGGAGTAACACGCCTCTATGGTTGGAAAGACTAAGGAAGAAGAGCGCAGTGTCAGTATGTGGAATTCCCAAGTATTCTTACAAATATATACAAAAGGCTACTTCTAATTTCACAACCATCATAGGCAATGGAGCATTTGGTCCTGTTTATAAAGCTCAGATGTCCACAGGTGAGACAGTGGCAGTTAAAGTTCTTGGTACTAATTCAAGACAAGGAGAACAGGAATTTTTAACTGAGGTTTTATTACTTGGAAGATTACATCACAAAAACCTTGTGGATTTGGTGGGGTATGTGGCAGAAAGAAGACAACATATGCTTCTTTTCATTTACACGAGCAATGGCAGTCTTGCTTCCCATTTGTATGGAAAGCATGAGCCATTGAGCTGGGGTTTGAGGCTAAGCATAGCACTAGATGTTGCAAGGGGACTGGAATATCTACATTATGGGGCTTCTCCACCTGTTGTGCATCGTGACATCAAATCTTCCAACATACTTTTGGACCATTCTATGAGAGCCAAGGTCACTGACTTCGGGCTCTCCAGACCAGAGATGATCAAACCTCGCACATCAAATATCAGAGGAACTTTCGGATATCTTGATCCTGAGTATTTGTCTACAAGAACCTTTACTAAGAAAAGTGATGTATATAGTTTTGGTGTACTACTATTTGAGCTTATCACTGGCAGGAATCCACAGCAAGGGCTCATGGAATATGTAAATCTAGCAGCAATGGAAGGTGAGGGTAAGGTTGGATGGGAAGAAATTGTTGACATGCAATTAAACGGAAAGTATGATTTGCATAATCTTAATGACTTGGCTTCACTTGCATTCAAATGTGTTAATGAAGTCTCTAAAAGCCGACCTCCGATGTACGACATTGTTCAAGAATTATCTCAGCTTCGTAAGAGGCATAGTAAAAATCATAGTCGAGCATCTTCTGATGCATTAAAGGAAGTCTCCATTGAAGTGGACCAGCTTGAAACTGACAAGTTTTCAACAATTGAGAGTACAAAGATGCTGCGCAGATTACATAGCCGATGA | 1263 | 0.4188 | MKRPTLTLIVGLCLGFVTGVGLAISIAVCVICGRKRTKVGRSSSQNAVTVPVNAIAVDSHSTLSDGLESPRTSEWSNTPLWLERLRKKSAVSVCGIPKYSYKYIQKATSNFTTIIGNGAFGPVYKAQMSTGETVAVKVLGTNSRQGEQEFLTEVLLLGRLHHKNLVDLVGYVAERRQHMLLFIYTSNGSLASHLYGKHEPLSWGLRLSIALDVARGLEYLHYGASPPVVHRDIKSSNILLDHSMRAKVTDFGLSRPEMIKPRTSNIRGTFGYLDPEYLSTRTFTKKSDVYSFGVLLFELITGRNPQQGLMEYVNLAAMEGEGKVGWEEIVDMQLNGKYDLHNLNDLASLAFKCVNEVSKSRPPMYDIVQELSQLRKRHSKNHSRASSDALKEVSIEVDQLETDKFSTIESTKMLRRLHSR | 420 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca09g01362 | 420 | Gene3D | Transferase(Phosphotransferase) domain 1 | 185 | 400 | - | - | |
Cca09g01362 | 420 | CDD | STKc_IRAK | 115 | 374 | - | - | |
Cca09g01362 | 420 | PANTHER | DUAL-SPECIFICITY KINASE DOMAIN PROTEIN | 8 | 405 | - | - | |
Cca09g01362 | 420 | ProSiteProfiles | Protein kinase domain profile. | 109 | 374 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca09g01362 | 420 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 228 | 240 | IPR008271 | GO:0004672|GO:0006468 | |
Cca09g01362 | 420 | Pfam | Protein tyrosine and serine/threonine kinase | 111 | 371 | IPR001245 | GO:0004672|GO:0006468 | |
Cca09g01362 | 420 | Gene3D | Phosphorylase Kinase; domain 1 | 75 | 184 | - | - | |
Cca09g01362 | 420 | PANTHER | OS01G0253100 PROTEIN | 8 | 405 | IPR045271 | GO:0004714|GO:0006468 | |
Cca09g01362 | 420 | SUPERFAMILY | Protein kinase-like (PK-like) | 93 | 371 | IPR011009 | - | |
Cca09g01362 | 420 | SMART | serkin_6 | 109 | 374 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca09g01362 | Cca-Chr9 | 36794866 | 36800254 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca09g01362 | 99 | 373 | Receptor kinase-like Gene Family | AT5G48740 | 44.561 | 2.06e-69 | 234 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-I-2 | Cca09g01362 | PK_Tyr_Ser-Thr | 2e-48 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca09g01362 | - | - | gmx:100816549 | 674.47 |