Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01349 ATGAGAGGAGGAGCTTCCTCTAACCTCTTCACTTTCTTTCTCTTCTGCCTCACTTCACTCGCTCTCTCCTCAGACACCTTAACACCATCCCAATCCCTCCCAACCAACCAAACCCTCCTCTCCCCAAACGCGATTTTCGAGCTTGGCTTCTTCTCCTACACCAACACCACCTGGTACCTAGGCATATGGTACAAAACCACCCACAACACAGACAAAACAATCGTCTGGGTCGCAAACCGCGACACCCCACTCCGCAACAACATCGGATTCCTCAAAATAGCCAACAAAGGAAACCTCGTCATCGTAAACCAATCCCAGAAACCCGTGTGGTCCACAAATGAAACCGGCGCCAGCGACCCAGTTCTCCAGCTTTTGGATTCGGGGAACCTGATCCTCAAAGAAGCAAACCAAAAGGACCCCACGAAACCCCTCTGGCAGAGCTTCGACCACCCCACAGACACGTTGCTACCGGGCATGAAACTAGGTTGGAACCTCGACACGGGCGTGGAGAAACACATGAGCTCGTGGAGGGTGACAAACGAGGACCCTTCAAGCGGCGATTTTTCCTTCAAGCTGGATTACCAGGGCCTGCCGGAAATCTTCCTCTGGAACAAAAACCAGAGAATCTACCGAAGCGGGCCCTGGAACGGCGAGAGATTCAGCGGGGTACCCGAGATGCAACCCGTAACGGACTCCATCAAGTTCACGTTTTTCGAGGACCAGCACCAGGTCTACTACACATTCTCCATCGGAAACCAGTCGCTATTTTCGAGACTCTCCGTTACCTCCGACGGGGAGCTTCAGCGGCTGACGTGGATAGAGAGCCGCCAGGCGTGGAACAAATTCTGGTACGCTCGGAAGGACCAATGCGACAGCTACCGAGAGTGTGGGCCCTACGGGATCTGCGACACCAACGCCTCGCCGGTCTGCCAGTGCGTGCGGGGGTTCCGGCCGCGCAACCAGCCCGCGTGGAATCTGCGGGATGGCTCCGACGGCTGCGTGCGGGACACGGCGCTCGCGTGCGGGGGCGACGGCTTCCTGCGGCTGAAGAACGTGAAGCTGCCGGAGACTACGACGGCGGTGGTGAACCGGAGCATGGGTTTGGCGGCGTGTGGGGAATTGTGCGGAGGGAACTGCTCGTGCACTGGTTATGCGAATGTTGATATCAGGAATGGAGGGAGTGGTTGCGTCATGTGGGTTGGGCAGCTATTGGACATCAGGAGATACCCTGCCGGTGGCCAGGATCTCTATGTCAGATTGGCGGCTAAGGATCTTGGTGACTTGGGGGTTGAAGGTGGTTCTCACAAGACAAGCGATACAGTTAAGAAAGTAGGCATCATAGTTGGTGTTGCAGCTTTTATACTATTGGCATGTTGCATCTATATCTTGTGGAAGAAGAGGAAATTGCAATGTATATTGAAAGGGAAGACAGAACATAGAGGTTTTTCGGAAAGAAGTCAGGATTTGTTAATGAATGAGAGAGTGTTTTCAAGTACCAGAGAACAGTCTCGTGAAAATAACCTGGACGACCTAGAGTTGCCATTTTTTGATTTTAACACCATAACAATGGCTACAAACAACTTCTCTGAAGAAAATAAACTTGGACAAGGAGGCTTTGGTATTGTTTATAAAGGCAGGTTGATGGAAGGACAAGACATTGCTGTGAAGAGATTATCAAAAACTTCTGGGCAAGGTATTGAAGAATTTAAGAATGAGGTCAAGTTAATTGTGAAGCTTCAACATCGAAATCTTGTCCGGCTGCTTGGTTGCAGCATTCAGGTGGATGAAAAGATGTTGGTGTATGAGTACATGGAAAATAGAAGCCTCGATGCCATTTTGTTTGACAAAGCAAAAAGATCCTCACTGGACTGGCATAGGCGCTTCAACATTATATGTGGAATAGCTAGAGGGCTTCTTTATTTGCACCAAGATTCCAGATTTAGGATCATCCACAGGGATCTCAAGGCAAGCAACATTCTACTTGACAAAGAGATGAATCCAAAGATATCAGACTTTGGTATGGCTAGAATTTTTGGCACAGATCAGACAGAAGCAAATACTGTGAGAGTTGTTGGAACATATGGTTATATGTCGCCTGAATATGCCATGGATGGGATCTTCTCAATAAAATCTGACGTTTTTAGCTTCGGGGTGCTTGTGCTGGAGATCATAAGTGGAAAGAAGAATAGAGGATTCTATTACGCAAACAAAGAATTGAATCTTCTAGGGCATGCGTGGAGGGTGTGGAAAGAAGGAAATGCGTTGGAACTGATTGATTCGTCTATTGACAATTCATATTCACCATCTGAAGTTCATAGGTGCATACAGGTGGGGCTGTTGTGCGTGCAAGAGCGTGCAGAAGATAGGCCAACCATGTCTTCAGTGGTCTTGATGCTGAGTAGTGATACTGCATCAATGCCAGAACCCAAAAACCCAGGGTTTTGTCTAGGAAGGAATCCTTTGGAAACTGATTCTTCTTCAAGTAAACAAGATGAATCATGCACTGTGAACCATGTCACTGTCACAATGCTAGATGCCAGGTAG 2544 0.4878 MRGGASSNLFTFFLFCLTSLALSSDTLTPSQSLPTNQTLLSPNAIFELGFFSYTNTTWYLGIWYKTTHNTDKTIVWVANRDTPLRNNIGFLKIANKGNLVIVNQSQKPVWSTNETGASDPVLQLLDSGNLILKEANQKDPTKPLWQSFDHPTDTLLPGMKLGWNLDTGVEKHMSSWRVTNEDPSSGDFSFKLDYQGLPEIFLWNKNQRIYRSGPWNGERFSGVPEMQPVTDSIKFTFFEDQHQVYYTFSIGNQSLFSRLSVTSDGELQRLTWIESRQAWNKFWYARKDQCDSYRECGPYGICDTNASPVCQCVRGFRPRNQPAWNLRDGSDGCVRDTALACGGDGFLRLKNVKLPETTTAVVNRSMGLAACGELCGGNCSCTGYANVDIRNGGSGCVMWVGQLLDIRRYPAGGQDLYVRLAAKDLGDLGVEGGSHKTSDTVKKVGIIVGVAAFILLACCIYILWKKRKLQCILKGKTEHRGFSERSQDLLMNERVFSSTREQSRENNLDDLELPFFDFNTITMATNNFSEENKLGQGGFGIVYKGRLMEGQDIAVKRLSKTSGQGIEEFKNEVKLIVKLQHRNLVRLLGCSIQVDEKMLVYEYMENRSLDAILFDKAKRSSLDWHRRFNIICGIARGLLYLHQDSRFRIIHRDLKASNILLDKEMNPKISDFGMARIFGTDQTEANTVRVVGTYGYMSPEYAMDGIFSIKSDVFSFGVLVLEIISGKKNRGFYYANKELNLLGHAWRVWKEGNALELIDSSIDNSYSPSEVHRCIQVGLLCVQERAEDRPTMSSVVLMLSSDTASMPEPKNPGFCLGRNPLETDSSSSKQDESCTVNHVTVTMLDAR 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01349 847 ProSitePatterns Serine/Threonine protein kinases active-site signature. 649 661 IPR008271 GO:0004672|GO:0006468
Cca09g01349 847 ProSiteProfiles PAN/Apple domain profile. 341 421 IPR003609 -
Cca09g01349 847 Gene3D Transferase(Phosphotransferase) domain 1 604 810 - -
Cca09g01349 847 Pfam D-mannose binding lectin 73 177 IPR001480 -
Cca09g01349 847 SMART blect_4 30 151 IPR001480 -
Cca09g01349 847 Pfam Receptor serine/threonine kinase 484 518 IPR022126 GO:0004674
Cca09g01349 847 ProSiteProfiles Bulb-type lectin domain profile. 24 145 IPR001480 -
Cca09g01349 847 ProSitePatterns Protein kinases ATP-binding region signature. 534 556 IPR017441 GO:0005524
Cca09g01349 847 SUPERFAMILY Protein kinase-like (PK-like) 511 799 IPR011009 -
Cca09g01349 847 Pfam PAN-like domain 341 406 IPR003609 -
Cca09g01349 847 SMART serkin_6 528 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g01349 847 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 10 846 - -
Cca09g01349 847 ProSiteProfiles Protein kinase domain profile. 528 814 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g01349 847 Gene3D - 19 149 IPR036426 -
Cca09g01349 847 Gene3D Phosphorylase Kinase; domain 1 501 603 - -
Cca09g01349 847 PIRSF SRK 5 847 IPR024171 GO:0004674
Cca09g01349 847 Pfam Protein tyrosine and serine/threonine kinase 531 797 IPR001245 GO:0004672|GO:0006468
Cca09g01349 847 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 217 IPR036426 -
Cca09g01349 847 PANTHER - 10 846 - -
Cca09g01349 847 CDD B_lectin 30 151 IPR001480 -
Cca09g01349 847 Pfam S-locus glycoprotein domain 210 319 IPR000858 GO:0048544
Cca09g01349 847 SMART ntp_6 341 420 IPR003609 -
Cca09g01349 847 CDD STKc_IRAK 534 799 - -
Cca09g01349 847 CDD PAN_AP_plant 337 421 - -
Cca09g01349 847 Pfam Domain of unknown function (DUF3403) 801 847 IPR021820 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01349 Cca-Chr9 36518538 36525294 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01349 516 847 Receptor kinase-like Gene Family AT4G11530 59.347 4.03e-135 416
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Cca09g01349 PK_Tyr_Ser-Thr 1.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01349 - - gmx:106799702 1458.74