Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01329 ATGTGTTGCAGACCTCGTTGCAGCTTCTGCTGCATCTACTACACAATCTACACCCTCATGTTCATGCTCATGCTTTCCATCATCCTCTTTTGGATAATCATCTCCCCCTCAAGTGTCAAGTTCCACGTAACCGATGCCTCCCTAACACAATTCAACCTCACAACCAACAACAACACCTTGTACTACAACTTCAAGGTCAACGTCACAGTGAGAAACCCCAACAACAACATCATAGTGTACTATAGGAGGATCACAGCAATAGCTTGGTACAAAGATAATGATTTTAGTTGGCTGAGCCTAACACCCTTTGACCAAGGCCACAAGAATACCACCTTCCTTCAAGCAGTGTTTGAAGGGAAGAGTGTGATCAAGCTCAAACCTCGTCAACTTGGAGAGTATAAAGAGGAAACGAGTGTTGGCGTTTACAATGACTTGGCTGTGGATTTTGATCTTAGAATCAGAGCTAAGTATGGAAGGTTCAAGAGTAGTCGTTTCAATCCACCCATTGTTCAGTGTCGCCGTTTGAGGGTTCCTTTGATTTCTAATGGTGAAACAACACCTCCTTTTGGTGTCACCAAATGTAAAAGTGATTCTTTCTTTGTAGATCGTGATGCTGCTGCAGGAACACGCTGA 633 0.436 MCCRPRCSFCCIYYTIYTLMFMLMLSIILFWIIISPSSVKFHVTDASLTQFNLTTNNNTLYYNFKVNVTVRNPNNNIIVYYRRITAIAWYKDNDFSWLSLTPFDQGHKNTTFLQAVFEGKSVIKLKPRQLGEYKEETSVGVYNDLAVDFDLRIRAKYGRFKSSRFNPPIVQCRRLRVPLISNGETTPPFGVTKCKSDSFFVDRDAAAGTR 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01329 210 PANTHER HARPIN-INDUCED 1 18 200 - -
Cca09g01329 210 PANTHER OS05G0367900 PROTEIN 18 200 IPR044839 GO:0098542
Cca09g01329 210 Pfam Late embryogenesis abundant protein 67 165 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01329 Cca-Chr9 36103657 36104289 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01329 33 179 SNARE and Associated Proteins AT1G32270 31.081 9.62e-19 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01329 - - gmx:100784278 336.65