Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01318 ATGCGCGGCAGCTATGTGGAGAGGTCAAGCGCCGTCGCCAGAGAGAAGCGCGCTTTGGATTCCGCTTCCGCTTCCGCCGAAGAACCTCAACCTGATCGGAAACGGCCTGCTTTGGCTAGCGTAATTGTTGAGGCCCTGAAAGTGGACAGTCTGCAAAAACTCTGCTCATCGCTGGAGCCTATTCTACGCAGAGTTGTTAGTGAAGAAGTTGAGCGTGCATTGGCAAAACTAGGCCCTTCCAAGCTTACTGGCAGGTCTTCACCAAAGCGAATAGAAGGCCCTGATGGCAAAAATTTACAATTGCATTTCAAGACCAGGCTGTCCCTTCCCCTCTTTACTGGTGGTAAAGTGGAGGGCGAGCAGGGGGCAGCCATACATATTGTTTTGATTGATGCAAACACAGGCCATATTGTCACATCAGGGCCTGAGTCGTGTGCCAAACTAGATATTATTGTACTAGAGGGAGATTTCAATAACGAGGATGATGATAATTGGAACGAAGAAGAGTTTGATAGTCATGTTGTGAAAGAGCGGGAAGGAAAAAGGCCTCTTCTAACTGGTGATCTGCAAGTCACACTGAAGGATGGTGTAGGAACACTGGGTGAGCTTACATTTACAGACAACTCTAGCTGGATAAGGAGTAGGAAGTTTAGATTGGGGCTGAAAGTTGCCCCAGGTTGTTGCGAGGGAATGCGTATTCGTGAAGCCAAATCAGAACCTTTCACTGTCAAGGATCATCGTGGAGAATTATACAAGAAACACTATCCCCCTGCCTTGAATGACGAGGTCTGGAGATTGGAGAAGATTGGCAAGGATGGGTCATTTCACAAAAGGCTAAACAAAGCTGGAATATATACTGTTGAGGACTTCCTAAGACTTGTGGTCAGAGACCCTCAGAGATTGCGGAATATTCTTGGGAGCGGCATGTCAAATAAGATGTGGGATATTCTTGTTGAGCATGCAAAGACTTGTGTTCTCAGTGGAAAACTTTATGTATACCATCCGGACGATGCAAGAAATGTGGGCGTTGTTTTCAATAACATTTATGAATTGAGTGGCTTAATTGCCAATGACCAATATTACTCAGCTGAGTCTCTCTCTGAGAACCAAAAGGTCTATGTAGACACGCTGGTGAAGAAAGCATATGAGAATTGGATGCATGTTATTGAATACGATGGGAAGTCTCTCCTCAATCAGGATAAGACTTTGGATACCGCTCACCCTGAGGCTCCAATGGCTTCCCATGAGTATACAAACTCACTTCAGCAGATTCCCATCCCAACTTTGCCACTTCCAGTACATGCTGGCCAGCCTTCAATGGATGCAGGAGTAACAGTTGGAGGTTATCATGATGGGACAACTTCCAGATTCTCCTTGCAACCACAGAATCCTAATCTTAATTCTTCCATTCAGTTTGATGATAATGCGTTTCCACTACAACACCAATTGATGAGTGTTTCACACCATGCCCAATTTTCAAGAAATGAAAATGGGTTGACTCTTGGTCCTCCACAACCATCCACGCATGGCTTCGAGACTGCCAGCAATTCAAATCCTACTTATGGAGGAGTTGAAGAGTACTTCCCAGAAGAGGAAATTCGTTTTAGAAGTCATGAGATGCTAGAAAATGAAGATATGCAGAATCTACTCCGTATTTTTAACATGGGAGGTCAACCACATGCTTCCTTTAATGCCCACGAAGATGGGTACCCCAGTTCATCTACATACATTTCTACAAACCCCATGGGCTACAATTTTGATGATGAACCAAACCGTTCCTCAGGCAAAGCTGTTGTGGGCTGGTTAAAGCTGAAGGCAGCTTTAAGATGGGGTATTTTTATTCGGAAGCAGGCTGCTGAAAGACGGGCACAACTGGTTGAATTGGATGACCCCTAG 1896 0.4525 MRGSYVERSSAVAREKRALDSASASAEEPQPDRKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLGPSKLTGRSSPKRIEGPDGKNLQLHFKTRLSLPLFTGGKVEGEQGAAIHIVLIDANTGHIVTSGPESCAKLDIIVLEGDFNNEDDDNWNEEEFDSHVVKEREGKRPLLTGDLQVTLKDGVGTLGELTFTDNSSWIRSRKFRLGLKVAPGCCEGMRIREAKSEPFTVKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIYTVEDFLRLVVRDPQRLRNILGSGMSNKMWDILVEHAKTCVLSGKLYVYHPDDARNVGVVFNNIYELSGLIANDQYYSAESLSENQKVYVDTLVKKAYENWMHVIEYDGKSLLNQDKTLDTAHPEAPMASHEYTNSLQQIPIPTLPLPVHAGQPSMDAGVTVGGYHDGTTSRFSLQPQNPNLNSSIQFDDNAFPLQHQLMSVSHHAQFSRNENGLTLGPPQPSTHGFETASNSNPTYGGVEEYFPEEEIRFRSHEMLENEDMQNLLRIFNMGGQPHASFNAHEDGYPSSSTYISTNPMGYNFDDEPNRSSGKAVVGWLKLKAALRWGIFIRKQAAERRAQLVELDDP 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01318 631 PANTHER OS02G0177800 PROTEIN 1 629 IPR012416 GO:0005516
Cca09g01318 631 Pfam Calmodulin binding protein central domain 258 324 IPR046830 -
Cca09g01318 631 Pfam Calmodulin binding protein-like N-terminal domain 99 246 IPR046831 -
Cca09g01318 631 MobiDBLite consensus disorder prediction 1 36 - -
Cca09g01318 631 PANTHER CALMODULIN-BINDING PROTEIN 1 629 - -
Cca09g01318 631 MobiDBLite consensus disorder prediction 488 520 - -
Cca09g01318 631 Pfam Calmodulin binding protein C-terminal domain 329 391 IPR046829 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01318 Cca-Chr9 35917289 35923099 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01318 14 626 Calmodulin-binding Proteins AT5G57580 62.323 0.0 762
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01318 - - gmx:100812605 1113.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01318 09 35917289 35923099 Cca08g02538 08 59711776 59716904 PCT