Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01308 ATGGAAACAACAGAGTTTGCAAGTCCCACAACGATCCCAACCTTGACTTGTCCACGCTTCGGAATTGGACGCTTTGAAATGGTTCTTCCACCCTTCATCATGCCACCTGCCATGTCTTTCTTAATAGAACCACGAGAAAGAGTGACAGAGGAAAATGAAATTTTCACCACTTTGCTTTTTGGTAGTTCCATTGTAGTTCATCACTTTATGGTAGAGTTTCTTCCTCCATTGGGAAAAAAAGGTTGTCTTACATGGTGCTATCCTCGTTTCACCTTTGGCCGGAATGTGGATATTATTGACCAAGGAAGAACATCTCCTACAATTGCACGTTTGATTTTTTTTTGCCCTCGGATGTTTTGGAGTACAGAGAACTTAAAAACTGTGGACTGGACCCCTCACAAGGTCACATCTAATTGGAAAATACCTTTGGCTGTTGCAACATTCATTTTGGTGCGAAGACTGTCAGCATGTGAAACTATGGGTTCTGCTACAACAATTTGCAATGATAATACTAGAACTTTGACCTTAAATCAGGAGCTGCGGAGATTATTTTAG 555 0.4108 METTEFASPTTIPTLTCPRFGIGRFEMVLPPFIMPPAMSFLIEPRERVTEENEIFTTLLFGSSIVVHHFMVEFLPPLGKKGCLTWCYPRFTFGRNVDIIDQGRTSPTIARLIFFCPRMFWSTENLKTVDWTPHKVTSNWKIPLAVATFILVRRLSACETMGSATTICNDNTRTLTLNQELRRLF 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01308 184 Gene3D - 149 163 - -
Cca09g01308 184 Gene3D - 164 176 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01308 Cca-Chr9 35814312 35824490 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01308 150 178 Primary Pumps ATPases AT5G57110 89.655 2.13e-10 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01308 K01537 - vra:106756366 58.5362