Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01298 ATGGATAACATTGTATCAAAGCTGACTAGTTTACACACCTTGGTTCTCTTACTTTTTCTATCTCATATGCCTGCTCTTTCATTTTCTTCTAGACATAGGCAATATTGGGGTGGAAGTAGGATATTGAGCTCTGGTGATAATGGTGATCTTGTGATTAACTTGCCTGGCCAGCCTCGTGTAGATTTCCAGCACTATGCTGGATATGTCACAGTCAATGAAACCAATGGACGAGCTCTCTTTTATTGGTTCTATGAGGCTATGAACAAGCCAGAAGAGAAACCATTGGTTCTTTGGCTTAATGGAGGTCCTGGGTGCTCTTCTGTGGGATATGGAGCAACACAAGAGATTGGTCCATTTTTAGTGGACACTGATGGCCATGGCCTCAAATTGAATAACTTCTCATGGAACAGAGAAGCCAACATGTTATTCCTGGAATCTCCTGTTGGAGTTGGCTTTTCCTACTCAAATACAACAAGTGACTATGACCAATTGGGAGATGACTTAACAGCTAATGATGCTTACTCTTTTATCCACAATTGGTTCCTAAAGTTTCCATCATATAAAACGAAGACATTTTACATAGCAGGGGAGAGCTATGCAGGAAAGTATGTACCAGAGCTGGCTGAACTCATCCATGATAGAAACAAGGACCCCTCCCTCTATATTGATCTCAAGGGTATTCTGTTGGGTAACCCTGAAACATCTGATGCTGAGGACTGGATGGGTCTGGTTGATTATGCTTGGAGCCATGCTGTGATATCTGATGAAACTCATAAAACAATAAAAACAAGTTGTGACTTTAACAGCAGTGATCCATGGCGCAATGAAGATTGTAGTGAAGCTGTGGATGAAGTACTCAAACAATACAACGAAATTGATATCTATAGTCTCTACACCTCAGTCTGTTTTGCCAGTACTGCACGTTCAAACGATCAAACTATGCTAACTTCGATGAAGCTTTCATCTAAAATGATGCCTAGGATGTTGGGTGGATATGATCCATGCCTGGATGACTATGCTAAAGCATTTTATAATAAACCAGATGTTCAGAAGGCTCTTCACGCCAGCGATGGTCACAACCTAAAGAATTGGACTATTTGCAACAACAAGATATTCAATGACTGGGCCGATTCAAAGCCATCTGTTATCCCAATTTACAAGAAGCTTATCTCAGCAGGACTTAGGATTTGGGTTTACAGTGGAGACACAGATGGTAGAGTGCCAGTGCTGTCCACAAGGTACAGCTTAAGCTCTCTTGCGCTGCCTGTCACTAAATCATGGAGGCCTTGGTACCATGATAATGAGGTTAGTGGGTGGTTTGAAGAATATGAGGGGCTTACATTTGCAACGTTTAGAGGAGCTGGCCATGCAGTTCCCTGTTTTAAACCAAGCAACTCACTTGCGTTCTTCTCCTCCTTTCTCAAAGGAGAGTCACCACCTTCTACAAAATAA 1452 0.4201 MDNIVSKLTSLHTLVLLLFLSHMPALSFSSRHRQYWGGSRILSSGDNGDLVINLPGQPRVDFQHYAGYVTVNETNGRALFYWFYEAMNKPEEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGHGLKLNNFSWNREANMLFLESPVGVGFSYSNTTSDYDQLGDDLTANDAYSFIHNWFLKFPSYKTKTFYIAGESYAGKYVPELAELIHDRNKDPSLYIDLKGILLGNPETSDAEDWMGLVDYAWSHAVISDETHKTIKTSCDFNSSDPWRNEDCSEAVDEVLKQYNEIDIYSLYTSVCFASTARSNDQTMLTSMKLSSKMMPRMLGGYDPCLDDYAKAFYNKPDVQKALHASDGHNLKNWTICNNKIFNDWADSKPSVIPIYKKLISAGLRIWVYSGDTDGRVPVLSTRYSLSSLALPVTKSWRPWYHDNEVSGWFEEYEGLTFATFRGAGHAVPCFKPSNSLAFFSSFLKGESPPSTK 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01298 483 ProSitePatterns Serine carboxypeptidases, serine active site. 194 201 IPR018202 GO:0004185
Cca09g01298 483 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 10 480 IPR001563 GO:0004185|GO:0006508
Cca09g01298 483 Gene3D alpha/beta hydrolase 46 304 IPR029058 -
Cca09g01298 483 PRINTS Carboxypeptidase C serine protease (S10) family signature 131 143 IPR001563 GO:0004185|GO:0006508
Cca09g01298 483 PRINTS Carboxypeptidase C serine protease (S10) family signature 144 154 IPR001563 GO:0004185|GO:0006508
Cca09g01298 483 PRINTS Carboxypeptidase C serine protease (S10) family signature 180 205 IPR001563 GO:0004185|GO:0006508
Cca09g01298 483 PRINTS Carboxypeptidase C serine protease (S10) family signature 446 459 IPR001563 GO:0004185|GO:0006508
Cca09g01298 483 SUPERFAMILY alpha/beta-Hydrolases 47 477 IPR029058 -
Cca09g01298 483 Pfam Serine carboxypeptidase 56 476 IPR001563 GO:0004185|GO:0006508
Cca09g01298 483 Gene3D - 335 371 - -
Cca09g01298 483 PANTHER CARBOXYPEPTIDASE 10 480 - -
Cca09g01298 483 Gene3D - 382 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01298 Cca-Chr9 35570540 35575254 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01298 340 477 Calmodulin-binding Proteins AT2G22960 34.532 5.26e-18 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01298 K16297 - gmx:100815993 926.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01298 09 35570540 35575254 Cca08g02516 08 59418855 59425451 PCT