Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01284 ATGGGGTTCTTTGCTCCTTCTGGAGATAGGTTTCCTTCTCCAAGCGCTGGATACAATTTTTGCCGATATATGTCGACAGTTAATCAGGGTTCAGATAAGATGGAGAATGACATAATGACTGATGTAGCTGATGTTCTCACTGACGCAACCATGGAGACTGTAGCTGCTCAGGCTCCTATTGTTAATGAAGTTGCAATCGCTGCTGCTGATTCTTTTTTGCCTGTGAAGGCCTTGCAGTATATGATAGATGCTGTGCATTCCTACACCGGGTTAAATTGGTGGGCAGCCATAGTTCTAACAACCCTTTTGATTCGAAGCGCTACAGTTCCACTCTTAATAAATCAACTTAAGGCCACTTATAAACTTACGTTAATGAGGCCTCACTTGGAAGAGATAAAGCAACAGATGGAAGGGATGACTATGGACCCCGTCGCCATTGCTAAAGGTCAGCAGCAGATGAAGAAGCTATTTAAGGAATATGGTGTGCATCCTTTCACGCCATTGATGGGACTCTTTATTCAAGGTCCTATTTTTGTTAGTTTTTTTCTTGCGATAACCAATATGGCTGAAAAAGTGCCATCATTCAAGCATGGCGGAGCTTTTTGGTTTATTGATCTTGCAACTCCAGATGCCTTGTACATTTTTCCATTTTTGGCTGCATTGTCATTCTTAATAACAGTGGAGTGTAATTTGCAAGAAGGGATGGAAGGAAATCCTGTGGCTGGTACCATGAAAAATGTCTCTAGGGGACTTGCTGTTCTTACAGTTCCTTTCACCATGGGATTTCCATCGGCAGTTTTCTGTTACTGGGTTACATCAAATTTGTTTTCACTTATGTATGGACTTGTACTTAAAGTTCCTGGTGTAAAGAAAACATTGGGTATTCCTGAAATTCCTGTTGCAGCACCCACCAATCCTCAATCTCCCTTTTCTATATTTCCGGCTCTAAAACAAGCTACAACAACGACAAATGGGCCAAGCTCAATGCCAGATGAACCATCAAAGCATTCAAATAAAAAGATATCTTCTTCTGCTGTTATTAGTCAAAGGCTTAGAAGTTTAGAGAAACAGGTGAAAGGAAGAAAGAAAAACAAGAAGTGA 1101 0.4096 MGFFAPSGDRFPSPSAGYNFCRYMSTVNQGSDKMENDIMTDVADVLTDATMETVAAQAPIVNEVAIAAADSFLPVKALQYMIDAVHSYTGLNWWAAIVLTTLLIRSATVPLLINQLKATYKLTLMRPHLEEIKQQMEGMTMDPVAIAKGQQQMKKLFKEYGVHPFTPLMGLFIQGPIFVSFFLAITNMAEKVPSFKHGGAFWFIDLATPDALYIFPFLAALSFLITVECNLQEGMEGNPVAGTMKNVSRGLAVLTVPFTMGFPSAVFCYWVTSNLFSLMYGLVLKVPGVKKTLGIPEIPVAAPTNPQSPFSIFPALKQATTTTNGPSSMPDEPSKHSNKKISSSAVISQRLRSLEKQVKGRKKNKK 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01284 366 MobiDBLite consensus disorder prediction 320 348 - -
Cca09g01284 366 Pfam 60Kd inner membrane protein 93 282 IPR001708 GO:0016021|GO:0032977
Cca09g01284 366 PANTHER MITOCHONDRIAL INNER MEMBRANE PROTEIN OXA1L 13 340 - -
Cca09g01284 366 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 92 281 IPR028055 -
Cca09g01284 366 PANTHER OXA1 13 340 IPR001708 GO:0016021|GO:0032977
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01284 Cca-Chr9 35317463 35325219 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01284 73 365 Chloroplast and Mitochondria Gene Families AT2G28800 23.102 7.90e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01284 K03217 - gmx:100817052 640.573