Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01271 ATGCTTTTCTTCATCCTCTTTCTTCTCTTCCTCCCTCTAATATTCATCATCAAACGTTATTCCAATGCATCAACCACCAAAAACTCACCCCCTTCACCTCCAAGGTTACCCCTACTGGGTAACCTCCACCAACTTGGTTTGTTCCCACACCGCACACTCCACGCTTTGGCTCAAACCTATGGCCCTCTCATGTTGCTTCACTTCGGGAACGTGCCAGTGCTTGTGGTCTCATCTTCTGAGGCAGCACGTGAGGTGATGAAAACCCACGACATTGTCTTCTCAGACAGGCCACAACGTAAGATGAATGACATCCTCTTATACGGTTCCAAAGACCTTGCAAGTTCCACATACGGAGAGTACTGGAGGCAAATAAGGAGCCTCAGTGTGTTGCACCTTCTTAGCACCAAAAGGGTTCAATCCTTTCGTGGTGTGAGGGAGGAGGAAACTGCTAGAATGATGGAGAACGTTAGAAAGTGTTGTTCTGACTCGTTGCATGTGAACTTGACTGACACTTGTGCTGCATTTACCAATGACGTGGCCTGTAGGGTGGCTCTTGGAAGGAGGTACCGTGGAGGAGAAGGGAGGGAGTTTCAGAAGCTGTTGTTGGAGTTTGGGGAGTTGCTTGGTGCTGTGTCTGTAGGGGATTATTTGCCTTGGCTTGATTGGGTGGACAAGGTTAGTGGTTTGTTTGGGAGAGGACATAGAGTGGCTAAACATTTGGATCAGTTTATAAGTGAAGTGATTGAAGAGCATGTTATGAATGGTAGAGATGTTGATGTTGATACTGAGGAGCAAAATGATTTTGTGGATGTTTTGCTTTCAGTGGAGAATAGTAACAGTACTGGCTACCCTGTTGATAGGACTGCAATTAAGGCCTTGATACTTGACATGTTTGTTGCAGGTACAGACACCACACACACAGCCCTGGAGTGGACAATGTCGGAACTGCTAAAGCACCCAACTGTGATGCATAAATTGCAAGATGAGGTGAGAAGTTTGGTTGGTGACAGCACTCACATAACTGAGGATGATTTGGGTCAAATGAACTACTTGAAGGCTGTGATCAAAGAAAGTTTTCGCCTACACCCTCCTGTTCCCTTACTTGTTCCTCGTAAATGCATGGAAGATATCAAAGTGAAGGGGTATGACATTGCAGCTGGCACTCAGGTATTGGTGAATGCTTTTGCAATTGCAAGAGACCCTTCATCTTGGGACCAACCTTTAGAGTTTAAGCCAGAAAGGTTTTTAAGAAGTTCAATAGACTTAAAAGGACATGATTTTGAGCTTATACCATTTGGTGCTGGAAGAAGGGGTTGCCCTGGAATAGTGTTTGCCATGACTACAATTGAGATGGCAATTGCAAACCTTGTCCATCAATTTGATTGGTCATTGCCTGGTGGGGAGGACTTGGACATGTCTGAAACTAATGGCCTTGCTGTTCATAGGAAGTCTCCTCTCATTGCAGTAGCAACTGCATATACATATCAGAGAAATTGA 1497 0.4509 MLFFILFLLFLPLIFIIKRYSNASTTKNSPPSPPRLPLLGNLHQLGLFPHRTLHALAQTYGPLMLLHFGNVPVLVVSSSEAAREVMKTHDIVFSDRPQRKMNDILLYGSKDLASSTYGEYWRQIRSLSVLHLLSTKRVQSFRGVREEETARMMENVRKCCSDSLHVNLTDTCAAFTNDVACRVALGRRYRGGEGREFQKLLLEFGELLGAVSVGDYLPWLDWVDKVSGLFGRGHRVAKHLDQFISEVIEEHVMNGRDVDVDTEEQNDFVDVLLSVENSNSTGYPVDRTAIKALILDMFVAGTDTTHTALEWTMSELLKHPTVMHKLQDEVRSLVGDSTHITEDDLGQMNYLKAVIKESFRLHPPVPLLVPRKCMEDIKVKGYDIAAGTQVLVNAFAIARDPSSWDQPLEFKPERFLRSSIDLKGHDFELIPFGAGRRGCPGIVFAMTTIEMAIANLVHQFDWSLPGGEDLDMSETNGLAVHRKSPLIAVATAYTYQRN 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01271 498 Pfam Cytochrome P450 30 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01271 498 Gene3D Cytochrome P450 20 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01271 498 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01271 498 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01271 498 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01271 498 PRINTS P450 superfamily signature 439 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01271 498 PANTHER CYTOCHROME P450 71B11-RELATED 5 493 - -
Cca09g01271 498 PANTHER CYTOCHROME P450 FAMILY PROTEIN 5 493 - -
Cca09g01271 498 SUPERFAMILY Cytochrome P450 30 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01271 498 PRINTS E-class P450 group I signature 57 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01271 498 PRINTS E-class P450 group I signature 81 102 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01271 498 PRINTS E-class P450 group I signature 175 193 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01271 498 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01271 498 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01271 498 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01271 498 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01271 498 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01271 498 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01271 498 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01271 Cca-Chr9 35188007 35190389 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01271 1 494 Cytochrome P450 AT3G48270 49.799 1.07e-176 504
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01271 - - gmx:100819183 805.053