Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01265 ATGAGTTGTGGCTGCTTTGGAGCCTCAACTCTCAAGAAGAAAAGGAATCATTCTCATACTCCTAATGAGATTGATGGTTTTCAACTTGATAATGTTACACATTTCTCTGATAAAGACCTGAGACTGGCTACTGATAACTATCACCCCAGCAAAAAGATAGGACGAGGAGGTTTTGGAACTGTTTACCAGGGAACCTTAAAAGATGGAAGACAAGTAGCAGTGAAGACACTTTCAGCTGGATCAAAGCAAGGAGTTCGTGAATTTTTAACTGAAATTAAAACTATATCAAATGTTAAGCATCCGAACCTTGTTGAATTGGTTGGTTGCTGTGTTCAAGAAACTAATCGTATACTAGTGTACGAATATGTGGAAAACAACAGCCTTGATGGTGCATTACTTGGCTCAAGGAGTTCAAATATCATATTAGACTGGAGAAAAAGATCTGGCATTTGCATGGGTACTGCTAGAGGTCTTGCATTTCTTCATGAAGAACTTGTGCCACACATTGTGCACAGAGACATCAAGGCAAGCAATGTACTACTTGATCGAGACTTCAATCCGAAAATAGGAGATTTCGGGTTGGCTAAATTATTTCCAGATGATATCACTCACATTAGCACAAGGATTGCTGGAACAACTGGTTACTTAGCACCAGAATATGCAATGGGTGGCCAGTTAACCATGAAGGCTGATGTATACAGTTTTGGGGTTCTTATACTTGAAATAATTAGTGGCAAAAGCAGTGCAAGGACAAACTGGGGAGGGTCCAACAAATTTCTGTTGGAATGGGCCTGGCAACTGTATGAAGAGGGGAGATTGTTGGAGCTTGTGGATCCAAACTTGGCTGAATTTCCTGAGGAAGAGGTAATTAGGTACATGAAGGTTGCTTTTTTCTGCACACAAGCAGCAGCAAGTAGAAGGCCAATGATGTCACAGGTTGTTGACATGCTGTCAAAGAACACGAGACTGAATGAAAAGCAACTAACAGCACCAGGACTCTTCCAGGATTCAGGAGCATCTTCTCTGAAGAAGTCATCATTTGAGTCCACAAGTTATCAATTTAGTTCTAACCCTGCCAGTTTTACTCAGTTGGCCCCAAGGTGA 1104 0.413 MSCGCFGASTLKKKRNHSHTPNEIDGFQLDNVTHFSDKDLRLATDNYHPSKKIGRGGFGTVYQGTLKDGRQVAVKTLSAGSKQGVREFLTEIKTISNVKHPNLVELVGCCVQETNRILVYEYVENNSLDGALLGSRSSNIILDWRKRSGICMGTARGLAFLHEELVPHIVHRDIKASNVLLDRDFNPKIGDFGLAKLFPDDITHISTRIAGTTGYLAPEYAMGGQLTMKADVYSFGVLILEIISGKSSARTNWGGSNKFLLEWAWQLYEEGRLLELVDPNLAEFPEEEVIRYMKVAFFCTQAAASRRPMMSQVVDMLSKNTRLNEKQLTAPGLFQDSGASSLKKSSFESTSYQFSSNPASFTQLAPR 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01265 367 PANTHER - 1 359 - -
Cca09g01265 367 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672|GO:0006468
Cca09g01265 367 Pfam Protein tyrosine and serine/threonine kinase 50 317 IPR001245 GO:0004672|GO:0006468
Cca09g01265 367 ProSiteProfiles Protein kinase domain profile. 47 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g01265 367 SUPERFAMILY Protein kinase-like (PK-like) 31 346 IPR011009 -
Cca09g01265 367 Gene3D Phosphorylase Kinase; domain 1 6 122 - -
Cca09g01265 367 SMART serkin_6 47 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g01265 367 CDD STKc_IRAK 53 319 - -
Cca09g01265 367 PIRSF ILK 8 329 - -
Cca09g01265 367 Gene3D Transferase(Phosphotransferase) domain 1 123 333 - -
Cca09g01265 367 ProSitePatterns Protein kinases ATP-binding region signature. 53 75 IPR017441 GO:0005524
Cca09g01265 367 MobiDBLite consensus disorder prediction 348 367 - -
Cca09g01265 367 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01265 Cca-Chr9 35117833 35122625 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01265 12 325 Receptor kinase-like Gene Family AT1G07650 55.975 8.58e-109 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Cca09g01265 PK_Tyr_Ser-Thr 1.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01265 - - gmx:100775344 671.389