Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01254 ATGATCGAATCGCATCTCCGTCATATGACGGCGTCTATGCATAACCCTCTTCATGCCTTTGAATGCTCATTCATTCACAAAAGCCACTACAACCCTCTTTCCACTTCCATAACCTCAATCACAATCCTTCACTTTCTTCCTCGCAATCTTTCACTTCCTCAGAGGAAAATGCCACAAGAGAATTCCCAAAACTCATTTTTCACATCTCCTTCAAAGAGAGGATTGAAGGGTTTGGTGTCCATGAACAAGGAGGCTTCATGCACTGCCACAGAGGAGAGTTTCAATGATCATGAATTGGCTCAGAGGAAGGCAGAGGAAGCAGGTTGGAGAAGATATAAAGCAACAGAATGGCTTCGAGAAATGGACCATGTTGCAGCATCTTCGATCTCTCCAACACCCTCCGAGGAAGACTTTTGCCTTGCACTCCGAAACGGTCTCATTCTCTGCAATGTCCTCAACAAAGTCAACCCCGGTGCTGTCCTCAAGGTGGTGGACAATCCTGGGCTTGCTGTTCAGTCCGCAGAGGGGGCGGCCCACTCTGCAATTCAGTATTTTGAGAATATGAGGAACTTTTTGGAGGCTGTGAAGGATATGCAGCTTTTGACATTTGAAGCATCTGATTTGGAGAAGGGAGGTTCATCAAATAAAGTTGTGGACTGCATTCTATGTTTGAAGGGGTTTTACGAATGGAAGTTATCTGGTGGGGTTGGTGTGTGGAGGTATGGTGGAACTGTGAGGATTACTTCCATTCCAAACAAGTCTCCTTCCTCCATAGTTGGCAGTGAAAGTGCTGATGAGTCACTAGATGAGTCTGAGTCATCACAGTATGAACAACTGCTAGAATTTCTTCAACTGTCTGAAGAGTTCTTGATTGAAGAAACCAGAACTGCCAATGTTCTAGCTTTCCTTTTTGATCAATTTGGACTTAGACTTCTTCAGGCTTACCTTAGAGAGGCCAATGGGATTGAAGATCTTCCTCTGAATGCAATGGTAATTGATACCTTACTCAGCAAGGTAGCCAAGGATTTCTCATCTTTGCTTGTATCTCAAAGCACTCAGCTTGGACTTTTTCTGAAGAAAATATTGAAAGGTGACATTGGTTGTCTCTCAAAGAGAGAGTTCATAGAAGCCATCTCACTATATCTTAATCAAAGAAGTAGTTTGGCATCAAACGATTTCTCCAAATTTTGTAATTGTGGTGGCAAACGTGATAGTATTCGACAAAATGCCAATTATTCTGCAAAATATGCTGAAGTAATCAATACTCAACAGAAACAACTTGAGGGTATGAAGTACTTTTTTGAAGAGACAAAATTGGAGGTCAAACAAATTCAATCTGAGTGGGAAGAAGAATTCAGTAGACTAGAGGATCACATCAAAAGCCTTGAAGTGGCCTCCTCTTCCTACCACAAAGTTTTGGAGGAGAATCGCCTTCTTTACAATCAAGTACAAGACCTCAAAGGAGCCATTAGGGTCTATTGTAGAGTGAGACCATTCTTACCAGGTCAATCAAATGGACACTCTACGGTAGACTATATTGGAGAGAATGGAGATATGATGATAGTAAATCCCCTTAAACATGGAAAAGATGCTAGAAGGGTATTTTCATTCAATAAGGTGTTTGGAACAAGTGTAACACAAGAACAAATTTATGCTGACACTCAACCGTTGATCAGATCTGTTTTAGATGGTTTTAATGTATGCATCTTTGCATACGGACAGACTGGCTCAGGGAAAACATACACAATGAGTGGTCCTGATCTGACAACTGAAGAGACATGGGGTGTAAACTATAGGGCTTTGCGTGACTTATTTCATATATCAAAGGAAAGGGCTGGTTCCATAAAATACGAGGTTTTCGTTCAAATGATTGAAATATACAATGAACAAGTGAGAGATTTGTTAGTCAGTGATGGCTCTAACAGAAGATATCCTTTAAGCAGCTCAAATATACGAAACAATTCTCAATTGAATGGCATCAATGTGCCTGATGCATTTTTAGTTCCAGTTACTTGTACTCAAGATGTTCTAGACTTGATGAGAACTGGTCAGAAGAACCGTGCTGTTGGTGCTACAGCTCTAAATGAGAGAAGCAGTCGCTCTCATAGTGTTTTGACTGTTCATGTTCGAGGAAGGGAGTTAGTTTCCAACTCCATTCTTAGAGGTTGTCTCCATCTTGTGGATTTGGCTGGAAGTGAGAGGGTTGACAAATCTGAGGCTGTTGGTGAGAGATTAAAGGAGGCTCAACATATAAATAGATCACTTTCTGCACTTGGGGATGTTATATCTGCCTTGGCACAGAAGAGTCCACATATCCCCTATAGGAATAGCAAGCTCACACAAGTGTTACAAGATTCTTTAGGCGGGCATGCAAAAACTTTGATGTTTGTCCATATAAATCCTGAACTTAATGCTATCGGGGAGACAATTAGCACACTCAAGTTTGCTGAGAGGGTTTCATCCATTGAACTTGGGGCTGCCCAATCTAATAAAGAAACTGGTGAAATTCGAGATCTAAAGGAAGAGATATCAAGTCTCAAATTGGCATTGGAGAGAAAAGAAGTAGAATTGGAGCAATGGAAGGCTGGGAATGCCCGAAACACCATTGATTCTCAAAAACCAAGAGCTGTTTCACCTTTTCAGTTACCAAAATATGGTACCATTGGCAACATGAAGCATGAAACTGGTCAAAGACTCATGGATGATAGAAACTTAGAGTCTAGAAGTTGCTCTTCAGGTAAGCAAAGAAGGTCAAGGTTTCCCTCAACATTTATGGACAAGGATTCCATGCCAAAAATGTCTCTTCTAAGTGATGAAAAGTTAGTGAGCTCAGTGAAGGGAAGATCACCATCCCCTCCAGTCAGAAGATCATTATCCAATGATAGAGGGTCAGTCATCAAAAGCAAGGTCAAAACTGAAACATCAGATAACCAACCAATATTAAAGCATCCATTTCCAGCTAGAGTACCTGCTAACAAATCCCTTATCACAATGCCAATGGCTGCATCCACTGACAATAACACAAGGGTGTATTTGAACTCACAAGAGCCATCAAAGCAAGAAAACATTTCCGAAACACTCTTCAACCTCCAGAAGGTCAACAACTCCAGGAAAGTACATCAAGAACTGGAGGAGGAACAATTCAAGCAAGCACTTAGTGCAGTAAGACAAGGTGGTATTAGAAAAAGTAAGGTTGAGAGTAAGGCTAAGGTCAAGCATCCGCAACTATCACCCTTTAAGATTCAAAAACCTGATCTGCTCCCAACATATATTCCTGACGTGGATTTTTCTGGTGAAATGACTGTGGAGACACCTCCAAAGAATGACTACTTTGAGGCTGAAAATGATCTGAGATTTATGGAGTCTTCTGTCCATGGTGCCTTAAGTCTCAAAAAAATACGTCAGAACTTTGCAAGGAATTTTCAGAACCTTGAATCAAGAGGAATCATGCAAACAGGAGAGCCTTTATTGGTTAGCAAAGTTGAGAACAAACTTTTGAATGGTTCAGGTAGCAATCTTAAAGAAGGAAGCAATGCATCCATTCCTGAATTTAGAAGGAGCAGATCTACCCCACGTGGAAAGTTTTTTGGTTTATCCTGA 3600 0.4108 MIESHLRHMTASMHNPLHAFECSFIHKSHYNPLSTSITSITILHFLPRNLSLPQRKMPQENSQNSFFTSPSKRGLKGLVSMNKEASCTATEESFNDHELAQRKAEEAGWRRYKATEWLREMDHVAASSISPTPSEEDFCLALRNGLILCNVLNKVNPGAVLKVVDNPGLAVQSAEGAAHSAIQYFENMRNFLEAVKDMQLLTFEASDLEKGGSSNKVVDCILCLKGFYEWKLSGGVGVWRYGGTVRITSIPNKSPSSIVGSESADESLDESESSQYEQLLEFLQLSEEFLIEETRTANVLAFLFDQFGLRLLQAYLREANGIEDLPLNAMVIDTLLSKVAKDFSSLLVSQSTQLGLFLKKILKGDIGCLSKREFIEAISLYLNQRSSLASNDFSKFCNCGGKRDSIRQNANYSAKYAEVINTQQKQLEGMKYFFEETKLEVKQIQSEWEEEFSRLEDHIKSLEVASSSYHKVLEENRLLYNQVQDLKGAIRVYCRVRPFLPGQSNGHSTVDYIGENGDMMIVNPLKHGKDARRVFSFNKVFGTSVTQEQIYADTQPLIRSVLDGFNVCIFAYGQTGSGKTYTMSGPDLTTEETWGVNYRALRDLFHISKERAGSIKYEVFVQMIEIYNEQVRDLLVSDGSNRRYPLSSSNIRNNSQLNGINVPDAFLVPVTCTQDVLDLMRTGQKNRAVGATALNERSSRSHSVLTVHVRGRELVSNSILRGCLHLVDLAGSERVDKSEAVGERLKEAQHINRSLSALGDVISALAQKSPHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPELNAIGETISTLKFAERVSSIELGAAQSNKETGEIRDLKEEISSLKLALERKEVELEQWKAGNARNTIDSQKPRAVSPFQLPKYGTIGNMKHETGQRLMDDRNLESRSCSSGKQRRSRFPSTFMDKDSMPKMSLLSDEKLVSSVKGRSPSPPVRRSLSNDRGSVIKSKVKTETSDNQPILKHPFPARVPANKSLITMPMAASTDNNTRVYLNSQEPSKQENISETLFNLQKVNNSRKVHQELEEEQFKQALSAVRQGGIRKSKVESKAKVKHPQLSPFKIQKPDLLPTYIPDVDFSGEMTVETPPKNDYFEAENDLRFMESSVHGALSLKKIRQNFARNFQNLESRGIMQTGEPLLVSKVENKLLNGSGSNLKEGSNASIPEFRRSRSTPRGKFFGLS 1199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01254 1199 MobiDBLite consensus disorder prediction 953 979 - -
Cca09g01254 1199 Gene3D - 101 228 IPR036872 -
Cca09g01254 1199 PANTHER KINESIN-LIKE PROTEIN KLP-3 74 1194 - -
Cca09g01254 1199 MobiDBLite consensus disorder prediction 1168 1185 - -
Cca09g01254 1199 SMART ch_5 110 227 IPR001715 GO:0005515
Cca09g01254 1199 ProSiteProfiles Kinesin motor domain profile. 489 822 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca09g01254 1199 ProSiteProfiles Calponin homology (CH) domain profile. 108 229 IPR001715 GO:0005515
Cca09g01254 1199 Gene3D Kinesin motor domain 432 824 IPR036961 -
Cca09g01254 1199 MobiDBLite consensus disorder prediction 901 980 - -
Cca09g01254 1199 Coils Coil 445 465 - -
Cca09g01254 1199 MobiDBLite consensus disorder prediction 1168 1199 - -
Cca09g01254 1199 SMART kinesin_4 487 830 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca09g01254 1199 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 490 859 IPR027417 -
Cca09g01254 1199 PANTHER HEAVY CHAIN, PUTATIVE-RELATED 74 1194 - -
Cca09g01254 1199 Coils Coil 829 856 - -
Cca09g01254 1199 Pfam Kinesin motor domain 495 822 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca09g01254 1199 PRINTS Kinesin heavy chain signature 723 741 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca09g01254 1199 PRINTS Kinesin heavy chain signature 564 585 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca09g01254 1199 PRINTS Kinesin heavy chain signature 692 709 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca09g01254 1199 PRINTS Kinesin heavy chain signature 772 793 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca09g01254 1199 SUPERFAMILY Calponin-homology domain, CH-domain 104 256 IPR036872 -
Cca09g01254 1199 Pfam Calponin homology (CH) domain 110 229 IPR001715 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01254 Cca-Chr9 34863606 34874749 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01254 480 822 Calmodulin-binding Proteins AT5G65930 42.241 7.23e-73 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01254 K10406 - gmx:100793458 2016.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01254 09 34863606 34874749 Cca09g01254 09 34863606 34874749 ECH
Cca09g01254 09 34863606 34874749 Cca05g02049 05 40250324 40265078 PCT