Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01251 ATGTTGGCTACTAGTGCAGTGGCATCTTTGCCCAAATTACCACCAGTGAGAAGAGGTGGCCACCGCATTGAAGAGAATGTCATTACGACGTGTAGGTTACCAAGACCATTACAGACAATCAATAATTCAATATCTTCAAGTTGTACGCAGTTTCCATTTGGCACAAGAGCTCATTCTATTCGGACAGCAACTATAATATGTGCTGCAGCTTTGAATGCAAGATGTGGTGCAGAGCAAACTCAAACTGTTACTCGCCAGGCTCCTACAATTACTCATGTTCCTGGCAAGGAGAAGTCACCACAACTTGACGACGGTGGAACTGGATTTCCGCCTCGTGACGACGACGATggtggaggtggaggaggtgggggtggaggCAACTGGTCTGGTGGATTTTTCTTTTTTGGGTTTCTTGCTTTCCTTGGCTTCTTAAAGGATAAGGAAAGTGAAGACACATACAGGGATAACCGAAGAAGGTGA 480 0.4188 MLATSAVASLPKLPPVRRGGHRIEENVITTCRLPRPLQTINNSISSSCTQFPFGTRAHSIRTATIICAAALNARCGAEQTQTVTRQAPTITHVPGKEKSPQLDDGGTGFPPRDDDDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEDTYRDNRRR 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01251 159 PANTHER PROTEIN FERTILITY RESTORER RF2, MITOCHONDRIAL 38 158 - -
Cca09g01251 159 MobiDBLite consensus disorder prediction 83 125 - -
Cca09g01251 159 PANTHER PROTEIN FERTILITY RESTORER RF2, MITOCHONDRIAL 38 158 IPR040299 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01251 Cca-Chr9 34777286 34781409 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01251 59 159 C2H2 Transcription Factor Family AT1G56200 70.874 8.03e-21 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01251 - - gmx:100306022 196.823