Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01249 ATGGCTTCATTTCCTTCAAATTCTGCATCAGGAGAACATAGCATCATGGCCAGTGCACAAAACAGGAATCCTCATGCTTCCTCACCTTCCTTCATGACTAGAGTGGCCATGAGAATGTCTAGATCAAGATGGTTCACCTTCTTGAGAAGAGTATTCCATTACCAAAATGGACCTAGATCTGATCTTGGCTCCAACCCTTTCAATTCTAGCACTTGGATGATGCTGGAGTTGTTTGCTTTGTTGGTCCAGATAACAAGCACAACATTCACTTTGGCCATTTCAAAGAGTGAGAAGCCTATTTGGCCTATGAGGGTGTGGATAGCTGGTTATGATATAGGGTGTGTCCTTAATCTTCTGCTACTTTGTGGCCGCTACCATCAACTTCATGTGACTCAAGGGGGTGCTCTTAGCCTTTCTGATTTGGAGCAGCAAAGAAACAATGAAGAAACAAGTGTGTACAGGAACTCACATTTAATGGACAAATGCCGTAGCTCACTAGAGCTTTTCTTTGCCATATGGTTCGTGATGGGCAATGTGTGGGCCTTTGACTCACGTTTTGGATCATTCCAACAAGCTCCAAAACTCCACGTTCTCTGCATCATCCTCCTTGCATGGAATGCCATATGCTGCCATATGCTACTCTTTCCCTTTTCTATTGTTTTTGCTCTTGTGTTGTTGTGTCCCACTCATGAGCACCCTCCTTGGATACAACATGAGCATGGGATCCTCTGCTAG 735 0.4435 MASFPSNSASGEHSIMASAQNRNPHASSPSFMTRVAMRMSRSRWFTFLRRVFHYQNGPRSDLGSNPFNSSTWMMLELFALLVQITSTTFTLAISKSEKPIWPMRVWIAGYDIGCVLNLLLLCGRYHQLHVTQGGALSLSDLEQQRNNEETSVYRNSHLMDKCRSSLELFFAIWFVMGNVWAFDSRFGSFQQAPKLHVLCIILLAWNAICCHMLLFPFSIVFALVLLCPTHEHPPWIQHEHGILC 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01249 244 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 5 217 - -
Cca09g01249 244 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 5 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01249 Cca-Chr9 34752736 34756819 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01249 9 209 C3H Transcription Factor Family AT5G55970 68.812 1.24e-98 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01249 - - gmx:100818715 381.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01249 09 34752736 34756819 Cca09g01249 09 34752736 34756819 ECH