Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01224 ATGGGTACCTACGTTGAAAAAACCACACGTGTGGAGGAACATGTTTTTCGTAGCCAATACCCACCTGTCCATATTCCTGACAATGTGACATTGCCGGAATTTGTGCTCCAAAATGCTGAATTGTATGCTGACAAGGTTGCATTTGTGGATGCTGTGACTGGAAAAGGGGTCACTTATAGTGAGGTGGTAAGGGGTGTACACAGGTTTTCAAAGGCCTTGAGATCACTTGGTTTGAGGAAAGGGCATGTTGTGATTGTAGTGCTTCCAAATGTAGTAGAGTATGCCATTGTTGCTCTGGGGATTATGGCTGCTGGTGGGGTGTTCTCAGGTGCAAATCCAGCATCTCATGTATCAGAAATTAAGAAACAGGCAGAGTCTGCTGATGCCAAATTAATTGTCACAAATGGCACAAACTATGAAAAGGTGAAGAGTCTAGAGCTACCTGTTATTGTGCTAGGAGATGAGATTATTGAAGGTGCCATGAATTGGAACAAGTTGCTTGAAGCAGCAGATCGTGCTGGTGATGATTTGAACAAAGAGCCTATTCAGCAGAATGATCTTTGTGCCATGCCATTCTCATCAGGCACCACAGGAATGTCAAAGGGTGTGATGCTGACTCATAGAAATCTAGTGGCTAATCTTTGCTCTACACTCTTTGGTGTGACCCCGGAAATGGTGGGGTTGGTCACCACACTAGGCTTGATTCCCTTCTTTCACATCTATGGCATCACTGGAATTTGTTGTGCCACTCTTAGGAGCAAAGGGAAAGTTGTGGTGATGAATAGGTTTGAGTTGAAAACATTTCTCAATGCCTTGATTGCACATGAGGTTATATTTGCACCCATTGTGCCCCCTATCATTCTCAGCTTGGTGAAAAACCCCATAGTGGATGAATTTGATCTCAGCAAGCTAAAACTACAGGCCATCATGACTGCAGCAGCACCACTTGCACCAGAACTACTTAATGCTTTTGAACACAAGTTTCCTGGTGTTTCTGTCCAAGAGGCATATGGACTAACTGAGCATAGTTGCATCACACTCACTCATGCACAAAAAGGATTGGGAAGTCCTCATAAAAATTCAGTAGGGTTCATCCTCCCAAATTTGGAAGTCAAGTTTGTTGATCCTGACACTGGTCGATCCCTCCCTAGGAACACACCTGGGGAACTTTGTGTAAGAAGCCAATGTGTAATGCAAGGTTACTACAAACAGGTGGATGAGACTTCCCATACCATTGACAAAAATGGATGGCTTCACACAGGTGACATAGGATTCATAGATGATGAAGAAAATGTATTTATCATTGATCGTATCAAGGAGTTGATTAAATACAAAGGGTTCCAAGTTGCTCCTGCAGAGTTAGAGGCTATTTTGTTGTCTCATTCATCGGTTGAAGATGCAGCTGTAGTGCCATTACCAGATGAAGAGGCAGGGGAAATCCCAGCTGCAAGTGTTGTTTTGAGTCCAGGTGCAAAAGAAAGTGAGGAGGACATCATGAACTATGTTGCTTCCAATGCTGCACATTACAAGAAAGTGAGGGTGGTGCACTTTGTGGAAGCCATACCAAAGTCACCATCTGGAAAAATAATGAGGAGACTTATCAAAGAGAAGATGGTGGAAAAGATGAAAACAAACTCCTTAACAAAATTTAAAACCAACACTATCTAA 1668 0.4293 MGTYVEKTTRVEEHVFRSQYPPVHIPDNVTLPEFVLQNAELYADKVAFVDAVTGKGVTYSEVVRGVHRFSKALRSLGLRKGHVVIVVLPNVVEYAIVALGIMAAGGVFSGANPASHVSEIKKQAESADAKLIVTNGTNYEKVKSLELPVIVLGDEIIEGAMNWNKLLEAADRAGDDLNKEPIQQNDLCAMPFSSGTTGMSKGVMLTHRNLVANLCSTLFGVTPEMVGLVTTLGLIPFFHIYGITGICCATLRSKGKVVVMNRFELKTFLNALIAHEVIFAPIVPPIILSLVKNPIVDEFDLSKLKLQAIMTAAAPLAPELLNAFEHKFPGVSVQEAYGLTEHSCITLTHAQKGLGSPHKNSVGFILPNLEVKFVDPDTGRSLPRNTPGELCVRSQCVMQGYYKQVDETSHTIDKNGWLHTGDIGFIDDEENVFIIDRIKELIKYKGFQVAPAELEAILLSHSSVEDAAVVPLPDEEAGEIPAASVVLSPGAKESEEDIMNYVASNAAHYKKVRVVHFVEAIPKSPSGKIMRRLIKEKMVEKMKTNSLTKFKTNTI 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01224 555 SUPERFAMILY Acetyl-CoA synthetase-like 15 540 - -
Cca09g01224 555 ProSitePatterns Putative AMP-binding domain signature. 190 201 IPR020845 -
Cca09g01224 555 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 10 541 - -
Cca09g01224 555 Pfam AMP-binding enzyme 37 444 IPR000873 -
Cca09g01224 555 Pfam AMP-binding enzyme C-terminal domain 453 528 IPR025110 -
Cca09g01224 555 Gene3D - 13 439 IPR042099 -
Cca09g01224 555 Gene3D - 440 543 IPR045851 -
Cca09g01224 555 PANTHER 4-COUMARATE--COA LIGASE-LIKE 1 10 541 - -
Cca09g01224 555 CDD 4CL 25 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01224 Cca-Chr9 34372723 34376499 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01224 13 539 Monolignol Biosynthesis Gene Families AT1G62940 74.669 0.0 804
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01224 K01904 - gmx:100811418 1011.13