Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01210 ATGTCTCCTTCTCTTCGCACATTCCTCTTCTCCCTCGCACTCTTCCTTCTCTTCTTCCGCCCCATCTCCGCCCAcgacgacgacgccgatgcggactccggcggcgccgccCCGGACCTCCGCGCGAGGCCCTTGATTCTGGCGAAGGTGTGGTGCCTGATAGTGATCTTCTTGGCGACGTTCGTGTCGGGCGTTTCGCCGTACGTGCTGAAGTGGAACGAGGGGTTCCTCGTTCTGGGGACCCAGTTCGCCGGAGGGGTGTTTCTGGGCACCGCCATGATGCACTTTCTCAGCGACGCCAACGAGACTTTCGGGGATTTGACTGAAAAAGAGTACCCTTTCGCCTTCATGCTCGCCTGCTCCGGCTACTTGATGACCCTGCTTGCCGATTCCGCCATTTCCTCTGTTTTGAACAAGATGGGTCGCCGTGGCCGCGCTGCTGCAGAGGATCTCGAGGTTCAAGGGGCTGATACAGTCAAAGCAAGTGGCAATGGTGTTACTTCTCAGTCTCAATACCAGAACCATTCCACTGATCATCACTTAGCAAACCCTGCACTTGGATCTGTCCGTTCAATTGGAGACACCATCTTGTTGATCGTTGCCCTTTGTGTACACTCCGTGTTTGAGGGCTTAGCAATTGGAGTTGCTGAGACCAAAGCAGATGCATGGAAAGCATTATGGACAATATGTCTGCACAAGATATTCGCAGCCATTGCAATGGGTATTGCACTCCTCAGAATGATTCCTGATCGTCCCCTTATGTCGTGTGCAGCCTATGCCTTCGCTTTTGCCATCTCAAGTCCAATTGGTGTGGCCATTGGAATCATATTGGATGCCACAACACAGGGTCATGTAGCGGATTGGATCTTTGCCATATCAATGGGTCTGGCTTGTGGGGTGTTTATCTATGTGTCAGTAAACCATCTTTTGGGAAAAGGGTACGTGCCCCACAAACCAACAAGGGTTGACTCGGCCTATTTCAAGTTTCTTGCAGTGTTGTTGGGCGTGGGAGTGATAGCGGTTGTGATGATTTGGGACACCTAA 1044 0.4981 MSPSLRTFLFSLALFLLFFRPISAHDDDADADSGGAAPDLRARPLILAKVWCLIVIFLATFVSGVSPYVLKWNEGFLVLGTQFAGGVFLGTAMMHFLSDANETFGDLTEKEYPFAFMLACSGYLMTLLADSAISSVLNKMGRRGRAAAEDLEVQGADTVKASGNGVTSQSQYQNHSTDHHLANPALGSVRSIGDTILLIVALCVHSVFEGLAIGVAETKADAWKALWTICLHKIFAAIAMGIALLRMIPDRPLMSCAAYAFAFAISSPIGVAIGIILDATTQGHVADWIFAISMGLACGVFIYVSVNHLLGKGYVPHKPTRVDSAYFKFLAVLLGVGVIAVVMIWDT 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01210 347 Pfam ZIP Zinc transporter 47 342 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Cca09g01210 347 PANTHER ZINC TRANSPORTER 11 24 346 - -
Cca09g01210 347 PANTHER ZINC/IRON TRANSPORTER 24 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01210 Cca-Chr9 34075912 34079105 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01210 26 347 Inorganic Solute Cotransporters AT1G55910 60.909 5.54e-138 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01210 K14709 - gmx:100809940 554.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01210 09 34075912 34079105 Cca09g01210 09 34075912 34079105 ECH