Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01204 ATGGCTGTGAACAATCGCTGTTTCGTGGAATGGAAAGAGCAGTTTGTTTCACAAGAGCGTGGTAACCGTGTGGTTCACTATTACCTGAAGGATGCTGCTGGTGAGTCCATTCTTGCAGTGGTAGGCACTGAGAGAAGTGTTAGACACATGTGCTATGTTGTTGCTGAAGAGTTCCTTGAAGTTTGTGGGAAGGAAGGTTCCATTCCAACTGGTTTCAAATGGAGATCTAGAAGAGAGGTGGTGGATTGGCTGACATCAACACTATCAAAGCAGAATCTGCAGGGAGATAGAAGTGTATCACCTGGTCATAACTTGGTACAAACTCATGAGACAACAAATGACAATGTCAATGAAATTACTGGTCATCCTGCACAAATAACAGATGACAAGGACTTTCCAATGAGTAGCTCCAAATTATCCAATTCAGACATTGTTTGGTCAGGAGTTGCGTGGAGATGTGGCAAACAACTTAAGCATTATCCCACTTTTTCCAGGAATGGCATCAAAATTGCGATTCAATCCTTTGTTTTTGTTATGGGAAAGGGAGAGAATCATTATATTGCTTATGTAGAGGATATGTATGAAGACAGGAGGGGACAGAAAAAGGTCAAAGTGAGATGGTTTCACCATAATCAGGAAGTCAAGGGTGTAGTTCCCGTACGAAATCCTCACCCTCGGGAAGTTTTTATCACACCTTATTCTCAAGTCATTAGTGCAGAGTGTGTAGATGGTCCTGCCACAGTCTTAACTCGTGAACACTATGAAAAATGCATGCCTTTCTTTTCCCCCACTTCAACAGAGAGAATACATTTGTGCTTTAGACAATTTAGAAGCAACAAAGTCAAGCCCTTTGACTTGAGTAAACTGCGTGGCTACCATGCTCAACCAATTCTTTCTTGCTTGCACCTTGATTCAACCCAGAACCCTGAGAAACTCACAAGAGAAAATGAAGAGTTTAGTGCAGGTGATGATGTGAAGGTAGGAGCCAAGAGGAGCAGAAGTGATAAGGGGTCTCCTCAGTCATGGATAAGTCGCCAGGGAGTTAGGAAGTTAATTAGAAATAAGCAAATGATGGTATACAAAACCTTCCAGGTTGCAAATTATGCAAGGCCCGAAAGGATATTGCTTTCTTTGAAGCAGGTTGAGTGTCAACCTTGGTCTAACCACACATACAAGATTGATGACAAGATAGAGTTGCTCTGTCAAGATAGTGGCATCAGAGGCTGCTGGTTCAGGTGTACAGTTGTTCAGGTAGCGCGGAAACAGTTGAGAGTCCAATACGATGATGTCCAGGATGAAGATGGAAGTGGAAATCTTGAGGAATGGATCCCTGCTTTCAAGTTGGCCAGGCCTGATAAACTTGGGATGAGGTATTCTGGTCGCCCCACCATCAGGCCAGCTCCACCTTACGAGGAACAAGAACCGGCTGTCCAGGTTGGAATTGCAGTTGATGCATGGTGGAGTGATGGCTGGTGGGAGGGGGTTGTAACTAGAATTGACAACTGTGGTGATGATAGTGTTCAAGTCTACTTTCCCGGTGAATGCTTGTTGATGAAAATGTGCAAGAAGGATTTAAGAATATCTAGAGATTGGTTAGGGGACAGTTGGATTAACATTAAAGCAAAACCTGAAATAACCACAACTGTATTCACAGCTAATAATAGCTTTAACACAAAGCTTTCCGTGTCCCCATCTATCGGCAAAGATGTGGACTCTGTTGGTTTTGCTAATTCATGTCATGGTGATCTTGTTAGTAATAAGCCTAATGGTGATGAAGAAGAGAAATTTGTGTGTTGTGATGGCTCTGCTGAAGATGGGGACTGTGTCCAGGATAATAAACCCTCTTCTGAAAAATGTACTCAAGTTGACAGTATTGAGATACATGGAAGTTGtgataatgaagatattggtgatgataatgataacagtaatgatagcaataacaatgatgatggtagtaacaagaatggtgttgagaatggtaatAAAGATGTGGAGGTTTTAGGAACTTCTGGACCGGACCATGAAACTGTAGAGCTCATGGAAGTGGCTGTATAA 2058 0.4096 MAVNNRCFVEWKEQFVSQERGNRVVHYYLKDAAGESILAVVGTERSVRHMCYVVAEEFLEVCGKEGSIPTGFKWRSRREVVDWLTSTLSKQNLQGDRSVSPGHNLVQTHETTNDNVNEITGHPAQITDDKDFPMSSSKLSNSDIVWSGVAWRCGKQLKHYPTFSRNGIKIAIQSFVFVMGKGENHYIAYVEDMYEDRRGQKKVKVRWFHHNQEVKGVVPVRNPHPREVFITPYSQVISAECVDGPATVLTREHYEKCMPFFSPTSTERIHLCFRQFRSNKVKPFDLSKLRGYHAQPILSCLHLDSTQNPEKLTRENEEFSAGDDVKVGAKRSRSDKGSPQSWISRQGVRKLIRNKQMMVYKTFQVANYARPERILLSLKQVECQPWSNHTYKIDDKIELLCQDSGIRGCWFRCTVVQVARKQLRVQYDDVQDEDGSGNLEEWIPAFKLARPDKLGMRYSGRPTIRPAPPYEEQEPAVQVGIAVDAWWSDGWWEGVVTRIDNCGDDSVQVYFPGECLLMKMCKKDLRISRDWLGDSWINIKAKPEITTTVFTANNSFNTKLSVSPSIGKDVDSVGFANSCHGDLVSNKPNGDEEEKFVCCDGSAEDGDCVQDNKPSSEKCTQVDSIEIHGSCDNEDIGDDNDNSNDSNNNDDGSNKNGVENGNKDVEVLGTSGPDHETVELMEVAV 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01204 685 Gene3D - 136 292 IPR043151 -
Cca09g01204 685 MobiDBLite consensus disorder prediction 646 660 - -
Cca09g01204 685 MobiDBLite consensus disorder prediction 630 685 - -
Cca09g01204 685 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 4 652 - -
Cca09g01204 685 SMART agenet_At_2 475 533 IPR014002 -
Cca09g01204 685 SMART agenet_At_2 389 454 IPR014002 -
Cca09g01204 685 MobiDBLite consensus disorder prediction 312 341 - -
Cca09g01204 685 ProSiteProfiles BAH domain profile. 168 287 IPR001025 GO:0003682
Cca09g01204 685 PANTHER OS07G0607300 PROTEIN 4 652 - -
Cca09g01204 685 Pfam Agenet domain 394 469 IPR008395 -
Cca09g01204 685 Pfam BAH domain 171 259 IPR001025 GO:0003682
Cca09g01204 685 SMART BAH_4 168 287 IPR001025 GO:0003682
Cca09g01204 685 MobiDBLite consensus disorder prediction 312 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01204 Cca-Chr9 33906664 33913521 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01204 403 531 PHD Transcription Factor Family AT5G58610 30.827 1.01e-11 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01204 - - gmx:100809407 1204.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01204 09 33906664 33913521 Cca09g01204 09 33906664 33913521 ECH