Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01195 ATGCAAGTTGAACAATATATTCATAATCCTCATGAACGCACAATGCCGCTTCAAGTCAGAAAGGGCACTCAACCTTCAGACGAGGAACCCATCATAATGGAACAACAAAGGGTTATTATTGAGTGTCTTCTAGGAAGAATTTCCACAACGGCTTTAGAAAAATCTCATTCTCTAGCTAATATCTCCCAGAGCTTTGTCAAGTTGCTTATGAATAGGACAACAATTGCTAGTCATCCTCTGCTAGCCAAATTTTCGCGGCCCCTTCACCCTTTCAACACAACACTCTACTGTTGCCAATCTATTTCACTCAGCAGCAACAACACTCAAAACCCTAGAGAAGAGCGTGCAAGTTCCGGCTACCCACCCACCATGACATTCAAGCGCAGGAATGGAGGCCGCAACAAACACGATCACGGCCACATCAAATTCATTCGATGCTCCAACTCACAAGATTGA 456 0.4408 MQVEQYIHNPHERTMPLQVRKGTQPSDEEPIIMEQQRVIIECLLGRISTTALEKSHSLANISQSFVKLLMNRTTIASHPLLAKFSRPLHPFNTTLYCCQSISLSSNNTQNPREERASSGYPPTMTFKRRNGGRNKHDHGHIKFIRCSNSQD 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01195 151 Pfam Ribosomal protein S26e 124 150 IPR000892 GO:0003735|GO:0005840|GO:0006412
Cca09g01195 151 MobiDBLite consensus disorder prediction 105 139 - -
Cca09g01195 151 Gene3D Ribosomal protein S26e 124 151 IPR038551 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01195 124 148 Cytoplasmic Ribosomal Protein Gene Family AT3G56340 84.000 3.86e-09 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01195 K02976 - jre:108994178 54.6842