Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01194 ATGGATCTCCAATCCCTCTACTTCACATCCGTATCCATTTTAATTTTTGTGTTTATGGCACACAAAATAATGACAAAGAAATCTGCCTCAGATCCAAATTTACCACCTGGGCCATGGAAGCTACCTATCATAGGGAACATACACAACCTTGTTTGCTCTCTTCCCCATCGTAGGCTGAGAGATTTATCAGCAAAATATGGACCCTTGATGCATCTGAAGCTTGGAGAGGTTTCTACTATTGTGGTTTCATCCCCAGAGTATGCTAAAGAGGTGCTGAAAACCCATGATCTTATCTTTGCATCAAGGCCTCCAATACTAGCTTCAAAGATAATGTCTTATGATTCCATGGGCATCTCTTTTGCACCTTATGGAGATTATTGGAGACAGATGAGGAAGATTTGTACATTGGAGCTATTAAGCTCAAAACGTGTCCAATCTTTCCAACCAATCAGAGACGAAGAACATACTAACTTGATCAAAAGGATTGCTTCAAAAGAAGGGTCAGCTACAAATCTCACCAAAGTAGTGGTTACAACACTATCTATGATCATTTCAAGGACAGCCTTTGGCAACAAGTGTAGGGACCATCAGAAATTCATATCAGCAGTAAAGGAAGCCACAGAGGTTGCTGGCCGCTTTGACTTGGGAGATTTGTACCCTTCTCCTGAATGGCTTCAGAACATCTCAGGATTGAAGCCTAAGCTTGAGAAAACTCATCAACAAACCGATCGAATTATGCAAAACATCATCAATGAACATAGAGAAGCCAAGTCAAGTGCAACAGAAGGCCAGGGTGAAGAAGTGGAGGATGATCTTGTAGATGTGCTCTTGAAGGAGGAGTTTGGCTTAAGTGATGATAGTATCAAGGCTGTGATTTTGGATGTCTATGGAGGTGGAACCGAGACTTCATCTACAACCATAATATGGGCAATGGCAGAGATTATAAAAAATCCAAGAGTGATGAAGAAGGTACAAGCTGAGGTAAGAGAGGTATTTGGTAAAGAAGGACATGCCCATGAAGGTGACATGGAGAATCTAAAATACTTGAAATGTGTTGTGAAAGAGACATTGAGATTACACCCTCCTGGTCCCCTTCTACTTCCAAGACATAGTGGACAAGCTTGTGAGATCAAAGGGTATCACATTCCTGTGAAGAGCAAGGTCATAGTGAATGCCTGGGCAATTGGAAGAGACCCAAATCATTGGAGTGAGGCAGAGAGGTTCTATCCTGAGAGGTTCACCGAAAGCTCTATTGACTTCAAAGGCAATAGCTTTGAGTACATTCCATTTGGTGCCGGAAGAAGAATATGCCCTGGCATCACATTTGGCTTGACCAATGTTGAGTTTCCACTTGCATTGTTAATGTATCATTTTGATTGGAAACTACCCAATGGAAAGAAGAATGAAGACTTGGACATGACTGAAACTTTTGGAGTATCAGTTTCTTTAAAAGATGATTTATACCTCATTCCTATCACTTTCCATCCTTAG 1491 0.4125 MDLQSLYFTSVSILIFVFMAHKIMTKKSASDPNLPPGPWKLPIIGNIHNLVCSLPHRRLRDLSAKYGPLMHLKLGEVSTIVVSSPEYAKEVLKTHDLIFASRPPILASKIMSYDSMGISFAPYGDYWRQMRKICTLELLSSKRVQSFQPIRDEEHTNLIKRIASKEGSATNLTKVVVTTLSMIISRTAFGNKCRDHQKFISAVKEATEVAGRFDLGDLYPSPEWLQNISGLKPKLEKTHQQTDRIMQNIINEHREAKSSATEGQGEEVEDDLVDVLLKEEFGLSDDSIKAVILDVYGGGTETSSTTIIWAMAEIIKNPRVMKKVQAEVREVFGKEGHAHEGDMENLKYLKCVVKETLRLHPPGPLLLPRHSGQACEIKGYHIPVKSKVIVNAWAIGRDPNHWSEAERFYPERFTESSIDFKGNSFEYIPFGAGRRICPGITFGLTNVEFPLALLMYHFDWKLPNGKKNEDLDMTETFGVSVSLKDDLYLIPITFHP 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01194 496 PANTHER CYTOCHROME P450 71D9 8 494 - -
Cca09g01194 496 SUPERFAMILY Cytochrome P450 35 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01194 496 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01194 496 PRINTS P450 superfamily signature 351 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01194 496 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01194 496 Gene3D Cytochrome P450 27 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01194 496 PANTHER CYTOCHROME P450 71B11-RELATED 8 494 - -
Cca09g01194 496 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Cca09g01194 496 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01194 496 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01194 496 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01194 496 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01194 496 PRINTS E-class P450 group I signature 350 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01194 496 PRINTS E-class P450 group I signature 391 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01194 496 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01194 496 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01194 496 Pfam Cytochrome P450 35 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01194 Cca-Chr9 33679168 33681677 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01194 3 494 Cytochrome P450 AT3G26300 44.181 8.26e-139 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01194 - K13267 gmx:100813216 825.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01194 09 33679168 33681677 Cca09g01194 09 33679168 33681677 ECH