Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01193 ATGGATCTTCAAATCCTCTACTTTACATCCATTTTCTCCATTTTCATTTTCATGTTAATTACACACAAGATAGTAACCAAAAAATCTGTCTCAACTCCAAATTTACCACCAGGGCCATGGAAGCTACCTGTCATAGGTAACATACACAACCTTGTTGGCTCTGCACTTCCCCATCACCGACTTAGAGATTTATCAGAAAAATATGGACCCTTGATGCATTTGAAGCTTGGAGAGGTTTCTACCATTGTGATTTCATCCCCAGAGTATGCCAAGGAGGTTATGAAAACCCATGATCATATCTTTGCCTCGAGGCCTTATATCATAGCTGCAGAGATAATGGACTATAATTTCAAGGGTATAGCTTTCACACCTTATGGTGATTATTGGAGACAGATAAAGAAGCTAATGTCATTGGAGATGCTAAACTCAAAACGTGTCCAGTCTTTCCAACCAATCAGAGACGAAGTGCTCACTGGTTTCATCAAATGGATTGCTTCAAAAGAAGGAACACCTGTTAATATTACCAAAGAAGTGATTTCAACAGTATTTGCCCTCACTGCAAGGATAGCCCTTGGCAACAATTGCAGGCACCATCAAAAACTAATATCACTGGTAAAGGAAGCTACAAAGGTTGCTGTAGGTTTTGATTTGGCAGATTTGTATCCTTCTGCTAAATGGCTTCAGCACATGTCTGGGTTGAAGCCTAAACTTGAGAAGTTGCATCAACAAGCTGACCAGATAGTGCAAAACATTATCAATGAACGCAGAGAGGCTAAATCAAGTGCCGCACAAGGCCAAGATGAAGACATGGAGGAAGTTCTTTTAGACGTGCTCTTGAAGCAGGAGTTCTTAAGTGATGATAATATCAAGGCTGTGATCTGGGATATCTTTGCAGGTGGAGGTGATACATCATCTTCAACCATATCATGGGCAATGACAGAAATGATTAAAACTCCAAGAATAATGGAAAAGGTACAAGCTGAGGTAAGAGAAGCATCTGATAGAGAAGGAAAGCCTAATAGAAGTGGCATAGAAAACCTAAAATATTTGAAATCTGTTGTTAATGAGACATTAAGACTACACCCTCCGAGTCCTGTTTTGATTCCAAGAGAAAGTGGACAAGCTTGTGAGATCAAAGGGTATCACATACCTATGAAAAGCAGGATCATAGTGAATGCTTGGGCAATTGCAAGAGATCCAAATGTGTGGACTGAGGCTGAGAGGTTTTATCCTGAGAGGTTCATTGAATGTTCTATTGACTACAAAGGTAATGATTTCAAATACATTCCATTTGGTGCTGGAAGAAGAATGTGCCCGGGCCTCACACTTGGCTTGAGCAACGTTGAGTATGCACTTGCATTGTTGATGTATCATTTTGATTGGAAACTTCCCAATGGAATGAAAAATGAGGATTTGGACATGACCGAGATATTTGGAATAACAGTCACTCAAAAAGATGATTTATATCTCATTCCAAAAACTTTTCATACTTAG 1494 0.3956 MDLQILYFTSIFSIFIFMLITHKIVTKKSVSTPNLPPGPWKLPVIGNIHNLVGSALPHHRLRDLSEKYGPLMHLKLGEVSTIVISSPEYAKEVMKTHDHIFASRPYIIAAEIMDYNFKGIAFTPYGDYWRQIKKLMSLEMLNSKRVQSFQPIRDEVLTGFIKWIASKEGTPVNITKEVISTVFALTARIALGNNCRHHQKLISLVKEATKVAVGFDLADLYPSAKWLQHMSGLKPKLEKLHQQADQIVQNIINERREAKSSAAQGQDEDMEEVLLDVLLKQEFLSDDNIKAVIWDIFAGGGDTSSSTISWAMTEMIKTPRIMEKVQAEVREASDREGKPNRSGIENLKYLKSVVNETLRLHPPSPVLIPRESGQACEIKGYHIPMKSRIIVNAWAIARDPNVWTEAERFYPERFIECSIDYKGNDFKYIPFGAGRRMCPGLTLGLSNVEYALALLMYHFDWKLPNGMKNEDLDMTEIFGITVTQKDDLYLIPKTFHT 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01193 497 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01193 497 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01193 497 PRINTS E-class P450 group I signature 288 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01193 497 PRINTS E-class P450 group I signature 308 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01193 497 PRINTS E-class P450 group I signature 351 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01193 497 PRINTS E-class P450 group I signature 392 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01193 497 PRINTS E-class P450 group I signature 428 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01193 497 PRINTS E-class P450 group I signature 438 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01193 497 PANTHER CYTOCHROME P450 71B11-RELATED 8 496 - -
Cca09g01193 497 SUPERFAMILY Cytochrome P450 36 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01193 497 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01193 497 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01193 497 PRINTS P450 superfamily signature 429 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01193 497 Pfam Cytochrome P450 36 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01193 497 Coils Coil 237 257 - -
Cca09g01193 497 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 431 440 IPR017972 GO:0005506|GO:0016705
Cca09g01193 497 PANTHER CYTOCHROME P450 71D9 8 496 - -
Cca09g01193 497 Gene3D Cytochrome P450 29 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01193 Cca-Chr9 33611905 33614456 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01193 4 495 Cytochrome P450 AT3G26300 39.286 1.60e-129 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01193 - K13267 gmx:100814284 815.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01193 09 33611905 33614456 Cca09g01193 09 33611905 33614456 ECH