Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01192 ATGGATCTTCAATTCCTCTACTTTACATCTATTTTCTCCATTTTCATGTTTATGACACACAGGATACTAACCAAAAAATCTTCCACAACTCCAAATTTACCACCAGGGCCATGGAAGCTACCAGTCATAGGGAACATACACAACCTTATTGGCTCTCCACTTCCCCATCATCGACTAAGAGATTTATCAGCAAAATATGGACCCTTGATGCATCTGAAGCTTGGAGAGGTTCCTACCGTTGTGGTTTCATCCCCAGTGTATGCCAAGGAGGTTATGAAAACGCATGATCACATCTTTGCATCAAGGCCTCATGTCCTAGCTGCAGAGATAATGGACTATAATTTCAAGGGTGTAGCTTTCACACCTTATGGTGATTATTGGAGACAGATGAAGAAGATCATGACACTGGAGCTACTAAGCTCAAAACGAGTCCAATCTTTCCAACCTATCAGAGAGGAAGTGCTCACTGATTTCATCAAATGGATTGCTACAAAAGAAGGAGAATCTTTTAATATTACCAAAGAAATGACCTCAACAGTATTTACAATTACTGCAAGGACAGCCCTTGGCAACAAGTGCAGGCACCATCAGAAACTGATATCAGTGGTAAAGGAAGCTACAATAATTTCTGGAGGTTTTGACTTGGGAGATTTGTACCCTTCTGCAAAATGGCTTCAGCATATGTCTGGGTTGAAGCCTAAGCTTGAGAAGTTGCATCAACAAGCTGACCAGATAATGCAACAAATCATCAATGAACATAGAGAGTCTAAGTCGAGAGCCACAGAAGAGCAAGGTGAAGAAGTGGATGAAGTTCTTCTGGATGTGCTCTTGAAGCAGGAGTTTTGCTTAGGTGATGATAGTATCAAGGCTGTGATCTGGGATATCTTTGGAGGTGGGAGTGATACATCATCTGCAACTATAACATGGGCAATGGCAGAAATGATTAAAAATCCAAGAACAATGGAAAAGGTACAAGCTGAGGTAAGAAAGGTATTTGATAAAGAAGGAAAACCTAATGGAAGTTGCATGGAGAACCTAAAATATTTGAAATCTGTTGTTAGTGAGACTTTAAGATTACACCCTCCTGGTCCTCTTTTGCTTCCAAGAGAATGTAGACAAGCCTGTGAGATCAATGGGTATCATATACCTATGAAAAGCAAGATCATAGTAAATGCTTGGGCAATTGCAAGAGATCAAAATGTGTGGACTGAGGCTGAGAGGTTTTATCCTGAGAGGTTTATTGAAAGTTCTGTTGACTACAAAGGCAATAATTTTAAGTTCATTCCATTTGGTGCTGGAAGGAGAATGTGTCCAGGCCTCACATTTGGCTTGAGCAACGTTGAGTACACACTTGCAATGTTGATGTATCATTTTAATTGGAAGCTTCCCAATGGAGTGAAAAATGAAGATTTGGACATGACTGAGATATTTGGAATAACAGTTACTCGAAAAGATGATTTATATCTCATTCCCAAAACATTTCATACTAAGTCGACTACTCCATAA 1506 0.3977 MDLQFLYFTSIFSIFMFMTHRILTKKSSTTPNLPPGPWKLPVIGNIHNLIGSPLPHHRLRDLSAKYGPLMHLKLGEVPTVVVSSPVYAKEVMKTHDHIFASRPHVLAAEIMDYNFKGVAFTPYGDYWRQMKKIMTLELLSSKRVQSFQPIREEVLTDFIKWIATKEGESFNITKEMTSTVFTITARTALGNKCRHHQKLISVVKEATIISGGFDLGDLYPSAKWLQHMSGLKPKLEKLHQQADQIMQQIINEHRESKSRATEEQGEEVDEVLLDVLLKQEFCLGDDSIKAVIWDIFGGGSDTSSATITWAMAEMIKNPRTMEKVQAEVRKVFDKEGKPNGSCMENLKYLKSVVSETLRLHPPGPLLLPRECRQACEINGYHIPMKSKIIVNAWAIARDQNVWTEAERFYPERFIESSVDYKGNNFKFIPFGAGRRMCPGLTFGLSNVEYTLAMLMYHFNWKLPNGVKNEDLDMTEIFGITVTRKDDLYLIPKTFHTKSTTP 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01192 501 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01192 501 PRINTS P450 superfamily signature 351 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01192 501 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01192 501 SUPERFAMILY Cytochrome P450 34 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01192 501 PANTHER CYTOCHROME P450 71B11-RELATED 10 495 - -
Cca09g01192 501 PANTHER CYTOCHROME P450 71D9 10 495 - -
Cca09g01192 501 Coils Coil 235 255 - -
Cca09g01192 501 Gene3D Cytochrome P450 26 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01192 501 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01192 501 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01192 501 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01192 501 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01192 501 PRINTS E-class P450 group I signature 350 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01192 501 PRINTS E-class P450 group I signature 391 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01192 501 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01192 501 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01192 501 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Cca09g01192 501 Pfam Cytochrome P450 34 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01192 Cca-Chr9 33602629 33605465 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01192 34 494 Cytochrome P450 AT3G26300 41.649 3.39e-129 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01192 - K13267 gmx:100814284 840.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01192 09 33602629 33605465 Cca09g01192 09 33602629 33605465 ECH