Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01189 ATGGACAAGTTTTTCATAATTCTCCATGTTTTCCTTACCTTTCTCTTTCTCTTGGTGTTATATAAAACAACGAAAAGTTCAAAATCCAAGAGTTCCACCACCAAATTACCCCCAGGGCCATGGAAGCTACCTCTCATTGGAAACTTGCACCAACTTTTTGGCTCAACTCTACCCCACCATGTTCTAAGAAACTTGGCCACTAAGTTTGGACCCTTACTTCATCTAAAACTAGGAGAGGTATCACACATCGTAATTTCTTCACCAGAAATGGCCAAAGAGATTATGAAAACACATGATATCACCTTTTCCAACAGGCCACAGATTATTGTTGCCAAAGTTGCATACAATGCCAAAGACATTGCCTTCTCTCCACATGGAGCATATTGGAGGCAACTAAGAAAGATGTGTACAGAAGAGCTATTAGCCCCAAAGCGTGTGCAAAGTTTTAGGTCCATAAGGGAAGAGGAGGTGTCACAATTCATTAGAACTATATCTTCAAGTGAAGGGTTGGTTGTGAACCTTAGTGAGAAGATTTACCCACTCACATATGGAATAACAGCAAGAGCAGCTCTTGGTGAAAAGTACATGCACCAGCAAGAGTTGATATGCATCATTGAAGAGGCAGTGCTACTTGCTGGAGGACTTTGTGTTGCTGATCTCTACCCTTCCATTACTTGGCTTCAAATGTTCAGTGTGGTGAAGGCTAAATCTGAAAAACTGTTCAGGAAGATTGATGGGATATTGGACCACATCATTGAAGATCACAAAAATAGGAGAAGCAGCAAATTGTGTGAAGGTGATCAAAAGGATTTGGTTGATGTTCTTCTAGGCTTTCAACAGCCAAACAAGGGCATTCCCCTGGATCATCCTTTGACTGATGAAAATGTTAAAGCTGTCATCCTGGATGTGTTCAGTGCTGGAACCGAAACATCATCAGCAGTTGTGGAATGGGGCATGTCAGAAATGGTGAAAAATCCAAAGGTGATGGAAAAGGCACAAGCTGAGTTGAGAAGGGTGTATAACAGCAAAGGGCATGTGGATGAGACTGAATTGGACCAATTGACATACTTGAAATGTGTCATCAAAGAAACAATGAGGCTACACCCTCCTTCACCACTGTTGCTTCCTAGAGAAAGCAAGGAAAAATGTGAGATCAATGGATATGAGATACCTGCTAAAACAAGGGTCCTCATCAATGCTTGGTCTATTGGAAGAGATCCTATGTATTGGAGTGACGCTGAGACATTTAAGCCAGAGAGATTTTTTGAGAGTTCAATAGATTTTAGAGGCACAAACTTTGAGTTTATACCATTTGGTGCTGGAAGGAGGATGTGTCCAGGCATTGCATTTGCCATTGCTGACATTGAGTTGCCACTTGCTAAGTTGCTTTACCATTTTGATTGGAGGCTTCCTAATGGAATCAAACATGAAGAACTTGACATGAGTGAATCATTTGGGTTAACTGCAAGAAGACGAAATGGGCTATGCTTGATTCCTACTATATATTATTCACACCAGCTGATAGATAGCTCACATATTTAA 1542 0.4099 MDKFFIILHVFLTFLFLLVLYKTTKSSKSKSSTTKLPPGPWKLPLIGNLHQLFGSTLPHHVLRNLATKFGPLLHLKLGEVSHIVISSPEMAKEIMKTHDITFSNRPQIIVAKVAYNAKDIAFSPHGAYWRQLRKMCTEELLAPKRVQSFRSIREEEVSQFIRTISSSEGLVVNLSEKIYPLTYGITARAALGEKYMHQQELICIIEEAVLLAGGLCVADLYPSITWLQMFSVVKAKSEKLFRKIDGILDHIIEDHKNRRSSKLCEGDQKDLVDVLLGFQQPNKGIPLDHPLTDENVKAVILDVFSAGTETSSAVVEWGMSEMVKNPKVMEKAQAELRRVYNSKGHVDETELDQLTYLKCVIKETMRLHPPSPLLLPRESKEKCEINGYEIPAKTRVLINAWSIGRDPMYWSDAETFKPERFFESSIDFRGTNFEFIPFGAGRRMCPGIAFAIADIELPLAKLLYHFDWRLPNGIKHEELDMSESFGLTARRRNGLCLIPTIYYSHQLIDSSHI 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01189 513 Gene3D Cytochrome P450 29 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01189 513 PANTHER CYTOCHROME P450 71B11-RELATED 11 502 - -
Cca09g01189 513 SUPERFAMILY Cytochrome P450 37 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01189 513 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01189 513 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01189 513 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01189 513 PRINTS P450 superfamily signature 445 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01189 513 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01189 513 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01189 513 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01189 513 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01189 513 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01189 513 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01189 513 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01189 513 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01189 513 PANTHER CYTOCHROME P450 71D10 11 502 - -
Cca09g01189 513 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Cca09g01189 513 Pfam Cytochrome P450 37 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01189 Cca-Chr9 33548719 33552465 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01189 37 502 Cytochrome P450 AT3G26330 41.772 5.85e-134 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01189 - K23806 csin:114319007 600.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01189 09 33548719 33552465 Cca09g01189 09 33548719 33552465 ECH