Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01160 ATGGATCGAAGATCGTTGATTGAAGAAGTCAGAAAGCAGTTGCGCAACAAGAGGTATGTTGTCATGTTTGATGACGTGTGGAATGAAAAATTTTGGGATGATGTTGAATCTGCTGTAATTGATAATAAAAATAAAAGTAGAATATTAATTACAACCAGATATGAGAAGGTTGCAGACTTCTGTAAGAAATCTTCTTTTATTGAAGTGCATAAGCTAGAAAAACCTTTAAGTGAAGAAGAATGTTTCAGATTGTTCTGTTACAAGGCATTTAAGTATGGTTTTGATGGACGTTGTCCAGAAGAACTTAAAGATATATCTCTTGAAATTGTTAGAAAGTGTAAAGGTTTACCTCTAGCAATTGTGGCCATCGGCGGTCTTTTATCTCAGAAAGATTTTTGA 399 0.3383 MDRRSLIEEVRKQLRNKRYVVMFDDVWNEKFWDDVESAVIDNKNKSRILITTRYEKVADFCKKSSFIEVHKLEKPLSEEECFRLFCYKAFKYGFDGRCPEELKDISLEIVRKCKGLPLAIVAIGGLLSQKDF 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01160 132 PRINTS Disease resistance protein signature 113 127 - -
Cca09g01160 132 PRINTS Disease resistance protein signature 13 27 - -
Cca09g01160 132 PANTHER DISEASE RESISTANCE PROTEIN RP 1 130 IPR044974 GO:0006952
Cca09g01160 132 Gene3D - 1 70 IPR027417 -
Cca09g01160 132 Gene3D - 75 131 IPR042197 -
Cca09g01160 132 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 130 IPR027417 -
Cca09g01160 132 PANTHER - 1 130 - -
Cca09g01160 132 Pfam NB-ARC domain 5 132 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01160 Cca-Chr9 32930750 32931148 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01160 10 124 WRKY Transcription Factor Family AT5G45050 27.826 1.64e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01160 K13457 - ccaj:109796490 258.455