Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01151 ATGGCAGAATCTGCATTGTCCTTGGCCGGTCAGCATTTGCTTCCAAAATTTTGGGAAGCTCTCAATATGCTAAAAGATCTCCCAAAAGAAGTTGCGGACCTTACAGATGAACTGGAGAGCTTTCAAGATTTCATCAATGATGCTGATCAAGTGGCTGAAACTGAACAAGATGGTGGTAGACGTGATAGAATCAAAAAAAGGGTGATGCGGCTGAGAGAAGTAGCTTTTCGCGTGGAAGATCTCATTGATGAATATAAGGTATGTGAGGAAAAGCAACCTGATGATCTTGGATGTGCAGCTTTACCATGTGAGGTTGTTGACTTCATCAAGACTCTGATCCATCGCATTAAAGTAGCATATGAGATTCAGGAAGTTAAGTCACTTGTTCCTGCAGAAAGAAATGGATTCAAAAGCCATTTTCCTTTAGAACAAAAGCCAAACAGTTCTAGAGGAAATCAAAATGTCACATGGCACAAACTTCGAATGGCTCCTCTCTACACTGGGGAAGCTGAGGTTGTTGGCTTTGACGGCCCTAAAGATCAATTGAAAGATTGGTTGATAAAGGGACGATTAGAGCGCACTGTCATCTCTGTGGTAGGAATGGGAGGACAGGGAAAAACCACTCTTGCAAAGTTGGTTTTTGACAACAAGGAGGTCTTTGAATGCTTCGATTGTCGTGCTTGGATCACAGTTTCGCAATCCTACTCTGTAGAAGGACTGCTGAGGGATATGTTGCAGAAGTTTGGCGAAGAAAGAATGAATGTTTCTTCGATGGATCAGATGTCCTTGATAGATCAAGTGAGAGCCCACTTGCATTCTAAAAGGTATGTTATCTTTTTTGATGACGTATGGAATAAATATTTTTGGGATGAGATTGACTTTGCTCTAATTGATAGCAAAAAAGGAAGTAGGATATTAATCACAACCAGAAACGAAGAGGTTACAGAGTTCTGTAAGAAATCTTCTTTCATTCAAGTGCACAAGATAGAGCCTTTAAGTGAAAAAGAATCTTTGAGATTGTTTTCTAAGAAGGCATTTGATATATGttaa 1050 0.4 MAESALSLAGQHLLPKFWEALNMLKDLPKEVADLTDELESFQDFINDADQVAETEQDGGRRDRIKKRVMRLREVAFRVEDLIDEYKVCEEKQPDDLGCAALPCEVVDFIKTLIHRIKVAYEIQEVKSLVPAERNGFKSHFPLEQKPNSSRGNQNVTWHKLRMAPLYTGEAEVVGFDGPKDQLKDWLIKGRLERTVISVVGMGGQGKTTLAKLVFDNKEVFECFDCRAWITVSQSYSVEGLLRDMLQKFGEERMNVSSMDQMSLIDQVRAHLHSKRYVIFFDDVWNKYFWDEIDFALIDSKKGSRILITTRNEEVTEFCKKSSFIQVHKIEPLSEKESLRLFSKKAFDIC 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01151 349 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 347 IPR027417 -
Cca09g01151 349 Pfam Rx N-terminal domain 6 93 IPR041118 -
Cca09g01151 349 Gene3D - 5 119 - -
Cca09g01151 349 PANTHER - 27 346 - -
Cca09g01151 349 CDD RX-CC_like 2 127 IPR038005 -
Cca09g01151 349 Gene3D - 160 327 IPR027417 -
Cca09g01151 349 PANTHER DISEASE RESISTANCE PROTEIN RP 27 346 IPR044974 GO:0006952
Cca09g01151 349 Pfam NB-ARC domain 178 347 IPR002182 GO:0043531
Cca09g01151 349 PRINTS Disease resistance protein signature 195 210 - -
Cca09g01151 349 PRINTS Disease resistance protein signature 270 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01151 Cca-Chr9 32811936 32812985 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01151 171 342 WRKY Transcription Factor Family AT5G45050 27.586 3.79e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01151 K13457 - ccaj:109796490 457.218