Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01146 ATGGGTATGGTACCACTGAATTTGATTCCTGAGGCAGCGAGGAATTTGGCTCATGATCACGCACAAGTGGTGCCCATATCACTCTTTGTGGCTGTTCTCTGCCTCTGCTTGGTCATTGGTCAATTGCTTGAAGAAAACCGATGGGTTAATGAATCCATTGTTGCCATTATAGTAGGATGCATTGCTGGAATAATACTGTTATTAATCACCAAAGGGAAGAGTTCTCACATCCTTACATTTAATGAAGAACTATTCTTCATATATCTCCTTCCTCCCATAATATTCAATGCAGGATTTCAGGTGAAGAAGAAACAGTTCTTCCATAACTTTTTAACAATCATGCTGTTTGGGGTGATCGGCGTTTTTATTTCTACCACTGTTATTACGTGTGGCAGCTGGTGGCTGTTTCCCAAGTTGAAATTGCTTGGCCTGAGCGGGCGGGATTATCTCGCTATAGGAACAATTTTCTCATCCACAGACACGGTTTGTACACTGCAGGTTCTTCATCAAGATGAAACACCTCTACTTTACAGTCTAGTCTTTGGGGAAGGAGTGGTAAATGATGCAACATCAGTTGTTCTCTTCCATGCAGTGCAAAAGCTTGATGTTTCAAGATTTAGTGGCAAGACATTCCGTGTTATTGGAGATTTCTTGTATCTATTTTTATCAAGCACTGGCCTTGGAGTTGTAACTGGCCTTCTCACAGCATATATCTTGAGAACTTTAAGCTTTGGAAGACATTCAAGTGTTCGTGAAATTGCATTGATGATGTTAATGGCATACCTATCCTACATGTTGGCAGAGCTATTTGATCTAAGTGGCATCCTCACCGTTTTCTTTTGTGGAATACTAATGTCACACTATGCATGGCATAATGTGACTGAAACTTCAAGAATCACAACCAGGCATGTGTTCGCAACAATGTCATTTATTGCAGAAACCTTCATATTTCTATATGTGGGAATGGATGCCCTTGATATTGAGAAGTGGAAGATGACTGAATTAAGTTATGGAAATTTAATGGGGATCTACAGTTCCTTAATCCTATTGATATTGCTTGGGAGAGCTGCATTTGTTTTTCCTCTCTCTGCTCTTGCCAATTATATGAGTACGCATGCTAACCAAGCATCGAGTATCACATTCAAACATCAGATAATCATTTGGTGGGCTGGGCTAATGAGGGGAGCTGTCTCCATTGCTCTGGCTTTCAAACAGTTCACATTTTCTGGAGTTACTTCTGATCCTGTTAATGCAACAATGATTACCAACACCATTATTGTTGTCCTTTTCAGCACACTGGTGTTTGGTTTTCTCACAAAACCACTAATTAGATATCTGCTCCCCCACAGTGCAACAAGGAAAAGCATCAGACATGAAGAATCAGGTCCACCGGTTGAGGACCTGAATCTACCTTTGCTATCCCTTGAGGAATCAGCAGCAACCAACATCAGCCGTGCCAAGGAAAGTTTGACCATGTTAATAGAAAGTCCTGTGTTCACCATACATCGCTATTGGAGGAAGTTTGATGATGCATACATGAGACCTATATTTGGGGGACCTTGTGGTAACCAGTCACAGTGCTAG 1584 0.4122 MGMVPLNLIPEAARNLAHDHAQVVPISLFVAVLCLCLVIGQLLEENRWVNESIVAIIVGCIAGIILLLITKGKSSHILTFNEELFFIYLLPPIIFNAGFQVKKKQFFHNFLTIMLFGVIGVFISTTVITCGSWWLFPKLKLLGLSGRDYLAIGTIFSSTDTVCTLQVLHQDETPLLYSLVFGEGVVNDATSVVLFHAVQKLDVSRFSGKTFRVIGDFLYLFLSSTGLGVVTGLLTAYILRTLSFGRHSSVREIALMMLMAYLSYMLAELFDLSGILTVFFCGILMSHYAWHNVTETSRITTRHVFATMSFIAETFIFLYVGMDALDIEKWKMTELSYGNLMGIYSSLILLILLGRAAFVFPLSALANYMSTHANQASSITFKHQIIIWWAGLMRGAVSIALAFKQFTFSGVTSDPVNATMITNTIIVVLFSTLVFGFLTKPLIRYLLPHSATRKSIRHEESGPPVEDLNLPLLSLEESAATNISRAKESLTMLIESPVFTIHRYWRKFDDAYMRPIFGGPCGNQSQC 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01146 527 Gene3D - 24 452 IPR038770 -
Cca09g01146 527 PANTHER SODIUM/HYDROGEN EXCHANGER 14 524 - -
Cca09g01146 527 Pfam Sodium/hydrogen exchanger family 29 443 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Cca09g01146 527 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Cca09g01146 527 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Cca09g01146 527 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Cca09g01146 527 PRINTS Na+/H+ exchanger signature 153 163 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Cca09g01146 527 PANTHER SODIUM/HYDROGEN EXCHANGER 14 524 IPR018422 GO:0006812|GO:0015299|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01146 Cca-Chr9 32753503 32761068 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01146 14 527 Antiporters AT5G55470 72.062 0.0 778
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01146 - - gmx:100813332 943.725
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01146 09 32753503 32761068 Cca09g01146 09 32753503 32761068 ECH