Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01038 ATGGATTCAGGCGGGCCACAAGTTGTTGAGCTGGAAAAAATGAATTTCAATGGATTTCTACAATCGGGAAGAAACGTGCAACATTTGCTCAAGGACTCTTGGTTGGTTCATCAGAAAACTTATACAAGGTGCAGGAAAATGGCCGAAATTGGTACTGCTGTGGCATCTTCAATAATAGAGCGTGTGGTGGATGCAATTGTATTCCGTGCACAGTATTTAATTCATTTCAACAAATCTGTCATTGATCTTCGAAAGTCAAAGAGAGGGTTAGAAAAGGCATTACAGCACATGAAAGAACGCGCTAAAGAAGCCACCACAAATGCTGAGAAGATTGTGCAACCTGTTGAAGAGTGGCTGAATCATGTGCAGAAGATTCTTGAAGATGCGCAAAGGCTGGAAGAAAGGGTGGAAGAAAGCCAATGCTGTTTGAACATGACATTTAAGTATTCTCTGGCAAAAGAGGTGATATTCGTTACACAACAAATGAACCTGCTCAATAACAATAACAAATTTGAGCCATTTTCACACCCCATTGACCTCTCAAGCATGAGTTACTTCTTTCCCAAAGACTTTGTGGCATTGGATTCTAGGAAGCCAGTTTATGAAGATCTACTGAAGGCAATCCAAGATGAGAGGATCAATGTGATTGGAGTAGTTGGCATGGGAGGTTCAGGTAAAAGCACTTTAGCAAGAGTGGTGGGAAAGCAAGTAGAGGAGTCAAAGTTTTTTGACAAGGTGGTTATGACAATTGTGTCTCAAGATGTCAAAGTGAGAGATATTCAAGGTCAAATAGCTGATCACTTGACTTTTTCATTAATGGAAGAGACAGAACTTGGCAGGGCACTACGGTTATCTCAAAGGTTAAAGACTGAGAAGATTCTCATCATCTTTGATGGTGTATGGGAGAAGCTGGACTTGGAAGCTATCGGGATTCCATTAAATGAGAATGACAAGAGATGTTGCATCCTCCTCACTACGCGCTACCAAGAAGTTTGCACTTCAATGAATTGCAAAAGCATGATTGAACTCTCTATGTTAAATGAAGATGAAGGTTGGACTTTGTTCAAGCAACATGCACAAATAGACGAGGATTCTCCTGAAGACTTGAGAGAGGTGGCAAAGAGAGTCTTTGGCAAATGTCAGGGACTGCTTTGTGCCATCTTGACAGTGGCAAGCACTTTAAAGGGAAAGACTTGTACAGGCTGGGAATTGGCATTATCAAGACTAGAAACTTCTGAATCAATTGATGTTCAAGAGGGCTTGACAAGTACCTATGAATGCAATGAACTAGAGGAAATAATTTGCTTGGATTCAAAGGATGCAGGGCAACTTAGATACCTGTATTCGCCTTCACAACCAATTTTCCCCAAGCTAAGGAAAATCTTAATCAAAGGATGCAACAAATTGAGAAAATTATTCTTCACAAGCATGGTTTCAAGCCTACCAGAGTTGAGAGAGCTGTCTGTACACAATTGCAATGAATTGGTGGAAATTATTTCTTCAGAGGAAGCTACACAATTCCCAAACCTTTCTTTTCCATCACAACAAGTTTCTTTCCCCAATTTGGGGGTGATTGAGATCAAAGGATGCAACAAATTGAAAACAATCTTCCTTTCAACCATTGTTTCAAACCTATCAGAGTTGAGAGAGTTGTCTATATGTGACTGTAACAACTTGGAGGAAATAATTTCTGCTGATTCCGTGAAAGCATGGAATCATAGAAATGTAACCGCTCCTTTCCCACATTTTTTCCCCAAATTGTGTAGGATTAGCATTGAGAATTGCGACAAAGTGAAAACATTCTTCTCTGCTACCACAGTTCTATGTCTACCTGAGTTGCAACAGCTAGTTGTGAAGGACTGCAACAAATGGGAGGAAATAATTTTTTTAGATTCAGATCAAGCAGGACAATTTAGAAACCTATATCTTCTTCACAAACAAGACTGTTTCCCCAAACTAAGAAGCATCCAGATTGAAAGATGCAACACATTGAAAACAATCGTCACTGATGCAATTGTTACAAGCCTACCAGAGTTGCTTGAGTTGATTGTAAAGGACTGCAACAAATGGGTGGAAATAATTTCTCTAGATTTAGAGCAAGCAAGAGAAGTTGGAAACCTGTCTTCACATTCAAAACAAATTTGTTTCCCGAAACTGCAGAGGATTGAGCTTGAAAGTTGCAAAAGCTTGAAAACAATCTTCTCCACAACTATTGTTACAAGCCTTCCAGAGTTGCAACAACTGGTTGTAAAGAACTGCAATGCATTGGAGGGAATAATTTCTTTAGATTCAGACGAAGCAAGACAACTTAGAAACTTATCTGCCTCTTCCCAAATGGTTTATTTCCCCAAATTGAAGACGACTGAGATTGAGAAATGCATGAAATTGAAAGCAATCTTCTCTACAGCCATTGCCACTAGCCTACCAGAGTTGGAGCAATTGATTGTAAAGGATTGCGATGAATTGAAGGAAATAATTTCTTTAGATTTAGATGAAGCTGGAGAACATAAAAACTTGGCCGTTCCTTTCCAAAATGTTTTCTTTCCTAAACTGAAATGTATTAGGATTAAAAGATGCTGCAGATTTAAAAGAATGTTCTCTGCAATCATTGTCAGCATCCTACCAGAGTTGGAACAGCTAGTTGTCAAGGACTGCAATGAATGGGTTGAAATAATTTCCTTAGATTCAGTGGATGCAGGACAACTTAGAAACCTATCTGCTCATTGTCAACAAGTTTGTTTCCGCAGGCTGAGGAAGATTGAGATCGAAAGATGCAACAAATTGAAAGCAATCTTCTCTGCAACCCTTGTTACAAGACTGCCGAGGTTGGAGATTCTAATTGTGATGGACTGCAATGAATGGGAGGAAATAATTTCCTTAGATTGTGATAAAGGTGAAAACAGAAACCTGTATTCTTTTTCCCAACAAGTTTGTTTTCCCATGTTGTTTGAAATTAACATTCAAAGTTGCAACAAAGTAAAAACAATCTTCCCTGCAACCATTGCAAGCCTACCGGAGTTGTGGCGAGTAGTTATAAAGGACTGTAATGAATGGGAAAAAATTATATCTTTAGATTCAGAGGAAGCAAGACATCTTCAAACCACATCAGCTTCTTCCCAGCAATTTTATATCCCCAAGTTGGAAATTATTTCTATTGAAAATTGCAATAAATTGAAAACAGTTTTCTGCACAACCTTGGCTACAAGCCTAACAGGGTTGAATCATCTTGATGTTAAGGACTGCAATGAATTGGAGTATATAATTTCTTTACCTTCAGAGGAAGCAGGGCAACTTGGAAACATATCTGCTCCTTCTCAACAAGTATTTTTCCCCAAACTAGGAAGTATTTGGATCTTAGGATGCAACAAAATGAAAACAATCTTCTTTGAAAACACTGTTGCAAGCCTATCAAGCTTGAAATCCTTGTTTGTAGCCGACTGTGACAATTTGGAGGCCATAGTTTCTCCATATTCAATGGAAGCAGAACATAGACACCTATCATCTCCTCCCCATCAAGTCTTTCTCCCAGAATTGGATAATATTGTGATTGTGGGGTGCAACAAATTGAAAACTATTTTCTTCAAAACCATTGTCTCAAGCCTACCAGAGTTAAAAAGGCTATGTGTTTCTAATTGCAACAAACTGGAGGATATAATTTCTTCTGATTCTAAGGAATTAGAACCACTTAGAAACCTATCAACTCCCCAGCAAGTTTATTTCCCCAAACTAAATAGCATTGCCATCCAAAATTGCAACAAGTTGAGAAAACTTTTCTCCTTAACCATTGTTGGAAGCTTGCCAGAGTTGGGAAGTCTGAATGTGGATCAATGTAATGAATTGGAAGAAGTACTTTCCTTTGATTCAGAGGAAGCATCACAAGTTGAAAACTTAACTGCTCTCTCCCAACAAGTTTGTTTCCCCAAACTCAGCTTCATTTGGATCAAAGAGTGCAACAAAATGAAATTCATTTTCTCTTATTCCATGGCCTGTCATTGTCCTTCCCTGCATTCACTAGGCTTGGAATCATGCTCTCAGCTTAAACAGATTGTTAAATTTGAACATAAAGGTACAAGTGAAGAAGGTGGTGGAGGTATGGTTATTGATGATGAACATAGGAAGCATTTATTATTTCCAGATCTGCATTGGCTACACCTCAAAAAGTTGCCAACTCTCAGTTGGATTTTCCCTTGGTTTGAATTTCAATATGGTCCTCTATCCAACATTGGTATCTTGACTATAGAAGATTGCCCTAAATATTTGATGTCTTCTGTTTCAACTTAA 4281 0.3861 MDSGGPQVVELEKMNFNGFLQSGRNVQHLLKDSWLVHQKTYTRCRKMAEIGTAVASSIIERVVDAIVFRAQYLIHFNKSVIDLRKSKRGLEKALQHMKERAKEATTNAEKIVQPVEEWLNHVQKILEDAQRLEERVEESQCCLNMTFKYSLAKEVIFVTQQMNLLNNNNKFEPFSHPIDLSSMSYFFPKDFVALDSRKPVYEDLLKAIQDERINVIGVVGMGGSGKSTLARVVGKQVEESKFFDKVVMTIVSQDVKVRDIQGQIADHLTFSLMEETELGRALRLSQRLKTEKILIIFDGVWEKLDLEAIGIPLNENDKRCCILLTTRYQEVCTSMNCKSMIELSMLNEDEGWTLFKQHAQIDEDSPEDLREVAKRVFGKCQGLLCAILTVASTLKGKTCTGWELALSRLETSESIDVQEGLTSTYECNELEEIICLDSKDAGQLRYLYSPSQPIFPKLRKILIKGCNKLRKLFFTSMVSSLPELRELSVHNCNELVEIISSEEATQFPNLSFPSQQVSFPNLGVIEIKGCNKLKTIFLSTIVSNLSELRELSICDCNNLEEIISADSVKAWNHRNVTAPFPHFFPKLCRISIENCDKVKTFFSATTVLCLPELQQLVVKDCNKWEEIIFLDSDQAGQFRNLYLLHKQDCFPKLRSIQIERCNTLKTIVTDAIVTSLPELLELIVKDCNKWVEIISLDLEQAREVGNLSSHSKQICFPKLQRIELESCKSLKTIFSTTIVTSLPELQQLVVKNCNALEGIISLDSDEARQLRNLSASSQMVYFPKLKTTEIEKCMKLKAIFSTAIATSLPELEQLIVKDCDELKEIISLDLDEAGEHKNLAVPFQNVFFPKLKCIRIKRCCRFKRMFSAIIVSILPELEQLVVKDCNEWVEIISLDSVDAGQLRNLSAHCQQVCFRRLRKIEIERCNKLKAIFSATLVTRLPRLEILIVMDCNEWEEIISLDCDKGENRNLYSFSQQVCFPMLFEINIQSCNKVKTIFPATIASLPELWRVVIKDCNEWEKIISLDSEEARHLQTTSASSQQFYIPKLEIISIENCNKLKTVFCTTLATSLTGLNHLDVKDCNELEYIISLPSEEAGQLGNISAPSQQVFFPKLGSIWILGCNKMKTIFFENTVASLSSLKSLFVADCDNLEAIVSPYSMEAEHRHLSSPPHQVFLPELDNIVIVGCNKLKTIFFKTIVSSLPELKRLCVSNCNKLEDIISSDSKELEPLRNLSTPQQVYFPKLNSIAIQNCNKLRKLFSLTIVGSLPELGSLNVDQCNELEEVLSFDSEEASQVENLTALSQQVCFPKLSFIWIKECNKMKFIFSYSMACHCPSLHSLGLESCSQLKQIVKFEHKGTSEEGGGGMVIDDEHRKHLLFPDLHWLHLKKLPTLSWIFPWFEFQYGPLSNIGILTIEDCPKYLMSSVST 1426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01038 1426 Pfam NB-ARC domain 203 434 IPR002182 GO:0043531
Cca09g01038 1426 SUPERFAMILY RNI-like 455 697 - -
Cca09g01038 1426 PANTHER - 455 505 - -
Cca09g01038 1426 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 778 828 - -
Cca09g01038 1426 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 912 967 - -
Cca09g01038 1426 Coils Coil 80 107 - -
Cca09g01038 1426 PANTHER - 1302 1396 - -
Cca09g01038 1426 PANTHER - 584 764 - -
Cca09g01038 1426 PANTHER - 1107 1290 - -
Cca09g01038 1426 SUPERFAMILY RNI-like 648 892 - -
Cca09g01038 1426 Gene3D - 186 343 IPR027417 -
Cca09g01038 1426 Gene3D Ribonuclease Inhibitor 425 650 IPR032675 -
Cca09g01038 1426 Gene3D Ribonuclease Inhibitor 1110 1426 IPR032675 -
Cca09g01038 1426 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 426 IPR027417 -
Cca09g01038 1426 PANTHER - 513 570 - -
Cca09g01038 1426 PANTHER - 54 422 - -
Cca09g01038 1426 PANTHER - 778 828 - -
Cca09g01038 1426 PANTHER - 912 967 - -
Cca09g01038 1426 Coils Coil 115 142 - -
Cca09g01038 1426 Gene3D - 345 424 IPR042197 -
Cca09g01038 1426 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 455 505 - -
Cca09g01038 1426 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 1302 1396 - -
Cca09g01038 1426 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 584 764 - -
Cca09g01038 1426 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 1107 1290 - -
Cca09g01038 1426 Gene3D Ribonuclease Inhibitor 830 961 IPR032675 -
Cca09g01038 1426 Gene3D Ribonuclease Inhibitor 695 829 IPR032675 -
Cca09g01038 1426 Gene3D Ribonuclease Inhibitor 962 1099 IPR032675 -
Cca09g01038 1426 PRINTS Disease resistance protein signature 287 301 - -
Cca09g01038 1426 PRINTS Disease resistance protein signature 543 559 - -
Cca09g01038 1426 PRINTS Disease resistance protein signature 215 230 - -
Cca09g01038 1426 PRINTS Disease resistance protein signature 380 394 - -
Cca09g01038 1426 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 513 570 - -
Cca09g01038 1426 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 54 422 - -
Cca09g01038 1426 SUPERFAMILY RNI-like 978 1282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01038 Cca-Chr9 30929794 30940215 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01038 197 437 WRKY Transcription Factor Family AT5G45050 26.357 1.11e-09 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01038 - - aprc:113854242 1652.11