Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01032 ATGGTTTCAAATGAGTACATAAGGTCACAATCAGAGGCTGTATTAGGGCAGGAACACTTAGATTGCATAAAGGCATTCTTCATGGGACAAGGAGAACGTAGCCTTGCTCATTTTCCAGGGAATCCTAATATTCAGATAACAAGCTGGATGAACTTGCCGGTGTATGAAGCAGATTTTGGGTGGGGAAAGCCTATATATTTTGGTTTAGGGTATGTGAATTCACATGATAGGGCACTGATTCTTCTGAGCCCAGAGGGCGATGGATCTGTTATTGTGTCCATACACTTCCAGATAGCACATATGCAACTTTTCAAGAAACTCTTCTACGAGGACTACTCTAAACTCTAA 348 0.4167 MVSNEYIRSQSEAVLGQEHLDCIKAFFMGQGERSLAHFPGNPNIQITSWMNLPVYEADFGWGKPIYFGLGYVNSHDRALILLSPEGDGSVIVSIHFQIAHMQLFKKLFYEDYSKL 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01032 115 Pfam Transferase family 38 110 - -
Cca09g01032 115 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 1 112 - -
Cca09g01032 115 Gene3D - 1 111 IPR023213 -
Cca09g01032 115 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 1 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01032 Cca-Chr9 30686813 30687160 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01032 36 110 Monolignol Biosynthesis Gene Families AT5G48930 48.000 1.63e-20 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01032 K13065 - gmx:100779814 184.111