Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01031 ATGATAACCATTGTGGCTTCATATAATGTCACACCAAATCAACCAACTCCTAAAGAGCCCTTATGGCTATCCGACAGTGACCTAGTCGCGCCCCTAAGTCATGTACCTACAATCTACATTTACAAAGCAAAACACAACAACACCATCATTGAGAGGTTGAGAGACTCTCTTAGCAAGATTTTGGTGTTCTACTATCCGGTGGCTGGCAGATTAATGTTGACAGAAAGTGGTAGAATGGAAGTGGATTGTAACGCAAAAGGAGTGACACTGCTTGAAGCTGAAACCACAAACACATTGGGTGATTATGGAGACTTTTCACCCTCCCAATCCACCAAGAAACTTGTTCCAACCGTTGATTACACTCAACCTATAGAGGAGCATCCCCTATTGCTGGTGCAATTAACAAAGTTTCATGGTGGTGAAGGCTTTGCCATTGGATTTGCTATTTTTCATCCTTTGGTTGATGGGATCTCCGCTATTAACTTCATCAACAAATGGGCAAAGGTGGCTCGAGGAGAAGCACTAGGGCATAATGAAATGCCATTTCTCGACCGAACATTATTAAAATTCCCACACCAACCATCGGCAACACGCATTGATATCCCCCAGTGGGGTTCAACGCAGCAACACAAAACAGACAAAGTTACTCAAAAGAAGAGGGAGATGAGTGTTGAGGTGTTCAAACTCACATCAAGCCACGTGGAGAAGCTTAAGAAGAAGGCTAACGACCAATCTTTAAAAGAAGGGTCGAGGCCTTATACCAGGTTTGAAGTTATTTCTGCTCACATATGGAGATGCTATGATAAGGCTCGTGAAATTGGTGAGAACCAACCAACAAGGGTTCGGTTTAGTGTTGACATTCGCAATAAGTTGATTCCACCACTCCCTCAAAACTATTTTGGGAATGCTTTGGCAAGAGCAGTGACGCATAAATGTTGTGTGGGAGATATCATATCAAGTCCGTTAATTTATGCTACTCAAAAGATAAGGGAAGCAGTTTATGCAGTTACTGATGAGTATATAAGGTCATATTTGAGTTCTATTTTTGGGCAAGGGCATTTGGATAGCATAGAGGCCTTTTTCTCTGGTCAAGGAAGCCCTATTAGTTCCCCAGATCCTAATGATCATGTCTTTATGATGACAAGTTGGATAACAATGCCAGTGTATGATGCAGATTTTGGATGGGGAAAGCCTGTGCATTTTGGTTTAGGAATTGAATTTCGAGAACATAGAGCAGTGATTCTTCCAAGTTCAGATGGAGATGGTGTTATTGTCTCCTTGAGTTTCCCAACAGTTCATTTGCAACTTATCAAGAAATTCTTCTACGAGGATATATGA 1338 0.417 MITIVASYNVTPNQPTPKEPLWLSDSDLVAPLSHVPTIYIYKAKHNNTIIERLRDSLSKILVFYYPVAGRLMLTESGRMEVDCNAKGVTLLEAETTNTLGDYGDFSPSQSTKKLVPTVDYTQPIEEHPLLLVQLTKFHGGEGFAIGFAIFHPLVDGISAINFINKWAKVARGEALGHNEMPFLDRTLLKFPHQPSATRIDIPQWGSTQQHKTDKVTQKKREMSVEVFKLTSSHVEKLKKKANDQSLKEGSRPYTRFEVISAHIWRCYDKAREIGENQPTRVRFSVDIRNKLIPPLPQNYFGNALARAVTHKCCVGDIISSPLIYATQKIREAVYAVTDEYIRSYLSSIFGQGHLDSIEAFFSGQGSPISSPDPNDHVFMMTSWITMPVYDADFGWGKPVHFGLGIEFREHRAVILPSSDGDGVIVSLSFPTVHLQLIKKFFYEDI 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01031 445 Pfam Transferase family 1 442 - -
Cca09g01031 445 Gene3D - 1 203 IPR023213 -
Cca09g01031 445 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 3 445 - -
Cca09g01031 445 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 3 445 - -
Cca09g01031 445 Gene3D - 204 443 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01031 Cca-Chr9 30661956 30663504 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01031 2 443 Monolignol Biosynthesis Gene Families AT5G48930 34.899 4.62e-85 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01031 K13065 - ccaj:109790793 901.738