Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01029 ATGTTAAACATTGTTGCATCTTATTGTGTTGTTCCAAGTGAAGAAACTCCCGAGACTCGTTTAAGGTTATCAGATTACGACCAAGTGGTGCGTTTGGGTCACACACCCAATATCTATATTTACAAAGCAAAGCACAACCACAACACCACTGAGAAGATGATAAAGTCACTCAGCAAAATTTTAGTGTTCTACTATCCAATAGCTGGCAGATTGAGCTTAACAGAAAGTGGTCGAATGGAATTGGATTGCAATGCAAAGGGAGTCACATTTCTTGAAGCTGAAACCACAAAATCAATGAGTGATTATGGAGACTTTTCACCTTCTGAATCCATCAAGGAACTCGTTCCAAAGATTGATTACACTACACAACCTATAGAGGAGCTTCCTTTGTTGTTTGTGCAACTGACAAGGTTCCATGGTGGTGAAGGCTTTGCCATTGGATCGGCTAACTCTCATGTTTTGTCTGATGGGCTTGCTCATATTCGATTCATCAATTCATGGGCAAAGGTGACTCGAGGAGAGACACTAGAGCCACATGAAATGCCATCTTTTTTGGATAGAACAGCACTAATATTCCAACGTTCACCTTCATCACCACGCTTTGATCACCCAGAGTTGAAGCCTCTTCCGCTGAAACTTGGAACCTCCGATGATGCTGCTGAGAAAAAGAAGAAGACAAGGGCTGTGTTATTGAAGCTAACAGCTAAACAAGTGGAGAAGCTGAAGAAGAAGGCCAATGAGCAACCCGTGAAAGAAGGGTCGAGACATTATAGCAGATTTGAAGCTATCACTGCTCATATATGGAGATGTGCATCAAAGGCTCGTGAACTTGATGAGAAGCAACCAACTCTACTTAGGTTCAATGTGGATATTCGCAATAGACTAATTCCTCCTCTTCCTAGGAACTATTTTGGGAATGCTTTGGTGGCAACAGTGACACCAAAATGTTACGCTGGAGAAATTATGTCGAAACCATTGAGCTATGCTGCCCAAAAAGTAAGAGAAGCAAATGAAATGGTTTCAAATGAGTACATAAGGTCACAATCAGAGGCTGTATTAGGGCAGGAACACTTAGATTGCATAAAGGCATTCTTCATGGGACAAGGAGAACGTAGCCTTGCTCATTTTCCAGGGAATCCTAATATTCAGATAACAAGCTGGATGAACTTGCCGGTGTATGAAGCAGATTTTGGGTGGGGAAAGCCTATATATTTTGGTTTAGGGTATGTGAATTCACATGATAGGGCACTGATTCTTCTGAGCCCAGAGGGCGATGGATCTGTTATTGTGTCCATACACTTCCAGATAGCACATATGCAACTTTTCAAGAAACTCTTCTACGAGGACTACTCTAAACTCTAA 1362 0.4178 MLNIVASYCVVPSEETPETRLRLSDYDQVVRLGHTPNIYIYKAKHNHNTTEKMIKSLSKILVFYYPIAGRLSLTESGRMELDCNAKGVTFLEAETTKSMSDYGDFSPSESIKELVPKIDYTTQPIEELPLLFVQLTRFHGGEGFAIGSANSHVLSDGLAHIRFINSWAKVTRGETLEPHEMPSFLDRTALIFQRSPSSPRFDHPELKPLPLKLGTSDDAAEKKKKTRAVLLKLTAKQVEKLKKKANEQPVKEGSRHYSRFEAITAHIWRCASKARELDEKQPTLLRFNVDIRNRLIPPLPRNYFGNALVATVTPKCYAGEIMSKPLSYAAQKVREANEMVSNEYIRSQSEAVLGQEHLDCIKAFFMGQGERSLAHFPGNPNIQITSWMNLPVYEADFGWGKPIYFGLGYVNSHDRALILLSPEGDGSVIVSIHFQIAHMQLFKKLFYEDYSKL 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01029 453 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 3 450 - -
Cca09g01029 453 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 3 450 - -
Cca09g01029 453 Pfam Transferase family 2 448 - -
Cca09g01029 453 Gene3D - 2 208 IPR023213 -
Cca09g01029 453 Gene3D - 215 449 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01029 Cca-Chr9 30620091 30627236 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01029 2 448 Monolignol Biosynthesis Gene Families AT5G48930 38.307 9.98e-99 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01029 K13065 - gmx:100779814 697.197