Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01027 ATGGCCGATTATGGAGACTTTGCACCTTCTGAATCCATCAAGGAACTCGTTCCAAAGATTGATTATACTACACAACCTATAGAGGAGCTTCCTTTGTTGTTTGTGCAATTGACAAGGTTCCATGGTGGTGAAGGCTTTGCCATTGGATCGGCTAACTCTCATGTTTTGTCTGATGGGCTTGCTCATATTCGATTCATGAATTCATGGGCAAAGGTGACTCGAGGAGAGACACTAGAGCCACATGAAATGCCATCTTTGGATAGAACAGCACTCATATTCCAACGTTCACCTTCATCACCACGCTTTGATCACCCAGAGTTGAAGCCTCTTCCTCTGAAACTTGGAGCCTCCGATAATGCTGCTGAGAAAAAGAAGAAGACAAGTGCTGTGTTATTGAAGCTAACAGCGAAACAAGTGGAGAAGCTGAAGAAGAAGGCCAACGAGCAACCCATGAAAGAAGGGTCGAGACATTATAGCAGATTTGAAGCTATCACTGCTCATATATGGAGATGTGCATCAAAGGCTCGTGAACTTGATGAGAAGCAACCAACTCTAGTTAGGTTCAATGTGGATATTCGCAATAGACTAATTCCTCCTCTTCCTAGGAACTATTTTGGGAATGCTTTGGTGGCAACAGTGACACCAAAATGTTACGCTGGAGAAATTATGTCAAAACCATTGAGCTATGCTGCCCAAAAAGTAAGAGAAGCAAATGAAATGGTTTCAAATGAGTACATAAGGTCACAATCAGAGGCTGTATTAGGGCAGGAACACTTAGATTGCATAAAGGCATTCTTCATGGGACAAGGAGAACGTAGCCTTGCTCATTTTCCAGGGAATCCTAATATTCAGATAACAAGCTGGATGAACTTGCCGGTGTATGAAGCAGATTTTGGGTGGGGAAAGCCTATATATTTTGGTTTAGGGTATGTGAATTCACATGATAGGGCACTGATTCTTCTGAGCCCAGAGGGCGATGGATCTGTTATTGTGTCCATACACTTCCAGATAGCACATATGCAACTTTTCAAGAAACTCTTCTACGAGGACTACTCTAAACTCTAA 1065 0.4263 MADYGDFAPSESIKELVPKIDYTTQPIEELPLLFVQLTRFHGGEGFAIGSANSHVLSDGLAHIRFMNSWAKVTRGETLEPHEMPSLDRTALIFQRSPSSPRFDHPELKPLPLKLGASDNAAEKKKKTSAVLLKLTAKQVEKLKKKANEQPMKEGSRHYSRFEAITAHIWRCASKARELDEKQPTLVRFNVDIRNRLIPPLPRNYFGNALVATVTPKCYAGEIMSKPLSYAAQKVREANEMVSNEYIRSQSEAVLGQEHLDCIKAFFMGQGERSLAHFPGNPNIQITSWMNLPVYEADFGWGKPIYFGLGYVNSHDRALILLSPEGDGSVIVSIHFQIAHMQLFKKLFYEDYSKL 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01027 354 Gene3D - 1 109 IPR023213 -
Cca09g01027 354 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 1 351 - -
Cca09g01027 354 Pfam Transferase family 3 349 - -
Cca09g01027 354 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 1 351 - -
Cca09g01027 354 Gene3D - 116 350 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01027 Cca-Chr9 30535580 30536644 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01027 3 349 Monolignol Biosynthesis Gene Families AT5G48930 36.888 9.33e-69 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01027 K13065 - gmx:100779814 551.592