Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01026 ATGAATTCATGGGCAAAGGTGACTCGAGGAGAGACACTAGAGCCACATGAAATGCCATCTTTGGATAGAACAGCACTCATATTCCAACGTTCACCTTCATCACCACGCTTTGATCACCCAGAGTTGAAGCCTCTTCCTCTGAAACTTGGAGCCTCCGATAATGCTGCTGAGAAAAAGAAGAAGACAAGTGCTGTGTTATTGAAGCTAACAGCGAAACAAGTGGAGAAGCTGAAGAAGAAGGCCAACGAGCAACCCATGAAAGAAGGGTCGAGACATTTGAAGCTATCACTGCTCATATATGGAGATGTGCATCAAAGGCTCGTGAACTTGATGAGAAGCAACCAACTCTAG 351 0.453 MNSWAKVTRGETLEPHEMPSLDRTALIFQRSPSSPRFDHPELKPLPLKLGASDNAAEKKKKTSAVLLKLTAKQVEKLKKKANEQPMKEGSRHLKLSLLIYGDVHQRLVNLMRSNQL 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01026 116 Pfam Transferase family 1 85 - -
Cca09g01026 116 MobiDBLite consensus disorder prediction 32 56 - -
Cca09g01026 116 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 1 91 - -
Cca09g01026 116 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 1 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01026 Cca-Chr9 30531077 30531427 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01026 1 83 Monolignol Biosynthesis Gene Families AT5G48930 33.735 6.13e-07 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01026 - K13065 gmx:100779814 145.206