Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01025 ATGTCAAAACCATTGAGCTATGCTGCCCAAAAAGTAAGAGAAGCAAATGAAATGGTTTCAAATGAGTACATAAGGTCACAATCAGAGGCTGTATTAGGGCAGGAACACTTAGATTGCATAAAGGCATTCTTCATGGGACAAGGAGAACGTAGCCTTGCTCATTTTCCAGGGAATCCTAATATTCAGATAACAAGCTGGATGAACTTGCCGGTGTATGAAGCAGATTTTGGGTGGGGAAAGCCTATATATTTTGGTTTAGGGTATGTGAATTCACATGATAGGGCACTGATTCTTCTGAGCCCAGAGGGCGATGGATCTGTTATTGTGTCCATACACTTCCAGATAGCACATATGCAACTTTTCAAGAAACTCTTCTACGAGGACTACTCTAAACTCTAA 399 0.411 MSKPLSYAAQKVREANEMVSNEYIRSQSEAVLGQEHLDCIKAFFMGQGERSLAHFPGNPNIQITSWMNLPVYEADFGWGKPIYFGLGYVNSHDRALILLSPEGDGSVIVSIHFQIAHMQLFKKLFYEDYSKL 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01025 132 Gene3D - 1 128 IPR023213 -
Cca09g01025 132 Pfam Transferase family 2 127 - -
Cca09g01025 132 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 3 129 - -
Cca09g01025 132 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 3 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01025 Cca-Chr9 30530568 30530966 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01025 1 127 Monolignol Biosynthesis Gene Families AT5G48930 38.583 5.65e-23 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01025 K13065 - gmx:100779814 211.46