Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01000 ATGCAGCAAGATCACAGGAAAAAGAGTTCAGCGGAGATGGATTTTTTCTCTGAATATGGTGACGCCAACCGGTACAAAATTCAAGAAGTCATTGGGAAGGGAAGTTATGGTGTTGTCTGTTCAGCCATTGACACTCATACCGGTGAAAAAGTGGCAATTAAGAAGATTCATGACATCTTTGAGCATATATCTGATGCTGCTCGAATTCTTCGCGAGATAAAGCTGCTTAGACTTCTTCGACATCCTGATATTGTTGAAATAAAACACATTATGCTGCCTCCTTCAAGGAAGGACTTCAAGGACATTTACGTTGTCTTTGAGCTCATGGAGTCTGATCTTCATCAAGTCATCAAAGCCAATGATGACTTGACAAAAGAACACTACCAGTTTTTTCTTTATCAATTACTCCGAGCATTAAAGTATATTCACACAGCAAATGTCTATCATCGAGATTTGAAGCCAAAGAATATACTGGCAAATGCAAACTGTAAACTTAAAATCTGTGATTTTGGGTTAGCCAGAGTTGCCTTCAGTGACACACCAACAACTATATTTTGGACGGATTATGTTGCTACAAGGTGGTATAGAGCTCCAGAGCTATGTGGGTCATTTTACTCGAAGTATACGCCAGCAATTGATATATGGAGTATAGGTTGCATCTTTGCTGAAGTATTAACAGGAAAACCACTTTTTCCTGGAAAAAATGTAGTCCATCAGTTGGATCTGATGACAGATCTTCTTGGAACTCCTTCACTGGATACTATATCACGGGTACGAAACGAGAAGGCAAGGAGATACCTAACTAGCATGAGGAAAAAGCAGCCCGTACCGTTTGCTCAAAAATTTCCCAATGCAGATCCTTTAGCACTAAGGCTGCTAGAAAGGTTGCTGGCTTTTGATCCAAAAGACCGGCCTACTGCTGAAGAGGCATTGGCTGATCCTTACTTCAAGGGACTGGCAAAAGTTGAGAGGGAACCATCCTGCCAGCCTATCACGAAAATGGAATTTGAATTTGAAAGACGAAGGGTCACAAAGGAAGAAATTAGAGAGCTGATTTTCCGTGAGATACTAGAGTATCATCCTCAACTATTGAAAGACTACATGAATGGAACAGAGAGAACTAATTTTCTTTATCCAAGTGCTGTTGATCAATTCAGAAAGCAGTTTGCTCATCTAGAGGAAAATGGTAAAAATGGTCCTGTTATGCCGCTTGACAGAAAGCATGTTTCTCTTCCAAGGTCAACGATTGTACATTCAAATACAGTACATCCAAAAGAGCAAACAAACATTGCTTCCAGCAAAAACCGTCCTACCGCCCAGGAATATAACAAGAACTCCAGAGATGCTTCAGAAATTCCATTGCCAAGGTCGATGCAGGGACCACAAAGAATTCCACTTGCAAAACCTGGTAAAGTTGTCGGGCCCGTTGTTCCATACGAGTATGGTAACATTGTCAAGGATTCTTATGATCCTAGGTCATTCATCAGAGGTTCTGTGCTTCCTACTCAGCCCGTTCCCCCAGCATATTATTATCAAAGACCCAGCAATGGAAGCCAAGAAAGACCAGCAGCAACAGAAGCTGACAAGAGTGTGCCTTTGCAAGCAAAACATGCATCACAACAACAATGTGGAGTCAATGCCAAGATGGCACCAGACATAGCTATTAATATTGACACAAATCCCTTTTTCATGACAAGGGCAGGAGTTAACAAGTTAGAGCAAGGTGATCAAATAGCCATAGAACCAAACTTGCTGCAGCCAAAGGCTTATGGTGCAATCAGTGCTGCAGCTGGGGCCACTGCTCACAGAAAAATTGGCCCTGTTCAGTATGGCATGACAAGAATGTTCTAG 1851 0.4182 MQQDHRKKSSAEMDFFSEYGDANRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRKDFKDIYVVFELMESDLHQVIKANDDLTKEHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFSDTPTTIFWTDYVATRWYRAPELCGSFYSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNEKARRYLTSMRKKQPVPFAQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAKVEREPSCQPITKMEFEFERRRVTKEEIRELIFREILEYHPQLLKDYMNGTERTNFLYPSAVDQFRKQFAHLEENGKNGPVMPLDRKHVSLPRSTIVHSNTVHPKEQTNIASSKNRPTAQEYNKNSRDASEIPLPRSMQGPQRIPLAKPGKVVGPVVPYEYGNIVKDSYDPRSFIRGSVLPTQPVPPAYYYQRPSNGSQERPAATEADKSVPLQAKHASQQQCGVNAKMAPDIAINIDTNPFFMTRAGVNKLEQGDQIAIEPNLLQPKAYGAISAAAGATAHRKIGPVQYGMTRMF 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01000 616 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g01000 616 MobiDBLite consensus disorder prediction 425 452 - -
Cca09g01000 616 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 492 - -
Cca09g01000 616 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Cca09g01000 616 SUPERFAMILY Protein kinase-like (PK-like) 21 320 IPR011009 -
Cca09g01000 616 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g01000 616 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Cca09g01000 616 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 492 - -
Cca09g01000 616 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Cca09g01000 616 Gene3D Phosphorylase Kinase; domain 1 40 362 - -
Cca09g01000 616 MobiDBLite consensus disorder prediction 425 466 - -
Cca09g01000 616 CDD STKc_TDY_MAPK 24 361 - -
Cca09g01000 616 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01000 Cca-Chr9 29986327 29993402 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01000 1 435 MAP Kinase Gene Family AT2G42880 88.991 0.0 800
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Cca09g01000 Pkinase 6.2e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01000 - - gmx:100811788 1147.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01000 09 29986327 29993402 Cca05g01888 05 38706244 38712804 PCT