Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g00995 ATGGCTCCCTCCTTGGTGCTTCCAAGGCTTGCAAATTGGGTCATGAAACAGGTGCTTGTTAAATCATGTCATGGAGTTGCAACGAAAATGAAAAGCTATGGATTTCATTGGGGCGATCTTTCACCTAAACCATTGCAACAACCTTTCCCTGATATTGCCACGTGTGGTTTGGAGGGTAGAGGCTCACACACACTTGTTTGTGACTTCCACAAAGCCCTCTTAAGGACCccttccttctttccctccttcattcTGGTTGCCTTTGAAGGTGGAAGCATTTTTAGGGCACTTGTCTTGCTTTGTTCATGCCCTATACTGTGGATTTTGAGCTATGAAATGAAGCTTAGGGTCATGATCTTAATCTCCTTTTGTGGACTCAGAATGAAGGACATGGAAAACACTGCAAGGGCAGTTTTGCCAAAGTTTTATTTGGAGAACCTCAACCTTGAGGCCTATGAGGTAGTGGATTCTGTAGGGTCTAGGGTTTTCTTCACCACTATGCCTAGAGTGATGGTGGAAGGGTTTCTCAAGGAGTATTTGAATGCTGATGCTGTTGTAGCCACAGAGTTGCACACTGCTGGATGTTACTTCACTGGTTTTCTCTCTAATTCTGGTTTGCTTGTCAAGCATAAAGCCCTAATGGATTATTTTGGAGATTCAAAGCCTGACCTTGGGATTATTGCTAACTCAAGTCTTCATGATCATCTTTTTCTGTCTCTTTGCAAGGAAGCTTATGTGATGAGCAATGCAGAGGGAAAAGTGATGCCAAGGAACAAATATCCAAAGCCTTTAATATTTCACGATGGAAGACTAGCATTTCTACCTACTCCATCAGCCACCCTCTTTATGTTCATGTGGCTTCCAATTGGATTTCTGTTGGCCATTTATAGAATTTTTCTGGGTGTTTTCCTGTGTTGCAGATTCACACAACCACTAGGAGCATGGAGTGGTGTAGGTCTGAATTTCAAGGACAACAACCCCCAAAGATCAGAGTCAAACAAAGGGGTACTGTATGTATGCACCCATAGGACTCTCTTGGATCCAATTTTTCTGAGCATATTCTTGGGAAGGCCTTTGACTGCTGTCACATACAGCCTGAGCAAGGTGTCTGAGATGATAGCCCCTATTAGGACCATAAGTCTCACAAGGGACAGAAAACAAGATGGGGAAACTATGAGGAGGCTGCTGAGTGAAGGGGACTTGGTGGTGTTCCCTGAAGGGACAACTTGTAGGGAGCCCTATCTTTTAAGGTTCAGTTCCTTGTTTGCTGAGCTGGCTGATGAGATTGTGCCTGTGGCTATGAATGCAAAAGTGACCATGTTCTATGGGACCACAGCAAGTGGACTAAAAGTCTTGGACCCTATTTTCTTCTTCATGAACCCTTGGCCTAGGTATGATATTGAGATACTTGAAAAGGTTCCTAAGGAACTCACATGTGCTAGTGGAAGGTCTAGTCATGAGGTGGCAAATTATATACAGAGAGAGCTGGCTGATGCATTGGGATTTGAGTGCACCAACCTCACAAGGAGGGATAAGTATATGATGCTGGCTGGGAATGAAGGGGTTGTTCAAGAAAAGAAGGGGAGGAGATTGTGTTAG 1599 0.434 MAPSLVLPRLANWVMKQVLVKSCHGVATKMKSYGFHWGDLSPKPLQQPFPDIATCGLEGRGSHTLVCDFHKALLRTPSFFPSFILVAFEGGSIFRALVLLCSCPILWILSYEMKLRVMILISFCGLRMKDMENTARAVLPKFYLENLNLEAYEVVDSVGSRVFFTTMPRVMVEGFLKEYLNADAVVATELHTAGCYFTGFLSNSGLLVKHKALMDYFGDSKPDLGIIANSSLHDHLFLSLCKEAYVMSNAEGKVMPRNKYPKPLIFHDGRLAFLPTPSATLFMFMWLPIGFLLAIYRIFLGVFLCCRFTQPLGAWSGVGLNFKDNNPQRSESNKGVLYVCTHRTLLDPIFLSIFLGRPLTAVTYSLSKVSEMIAPIRTISLTRDRKQDGETMRRLLSEGDLVVFPEGTTCREPYLLRFSSLFAELADEIVPVAMNAKVTMFYGTTASGLKVLDPIFFFMNPWPRYDIEILEKVPKELTCASGRSSHEVANYIQRELADALGFECTNLTRRDKYMMLAGNEGVVQEKKGRRLC 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g00995 532 PANTHER ANCIENT UBIQUITOUS PROTEIN 23 526 - -
Cca09g00995 532 SMART plsc_2 336 437 IPR002123 GO:0016746
Cca09g00995 532 Pfam Acyltransferase 325 429 IPR002123 GO:0016746
Cca09g00995 532 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 253 524 - -
Cca09g00995 532 CDD LPLAT 312 497 - -
Cca09g00995 532 PANTHER GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 1 23 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g00995 Cca-Chr9 29889057 29891814 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g00995 5 524 Acyl Lipid Metabolism Gene Families AT1G06520 54.530 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g00995 K13508 - gmx:100786742 929.858
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g00995 09 29889057 29891814 Cca05g01960 05 39409758 39413205 PCT
Cca05g01883 05 38666686 38668914 Cca09g00995 09 29889057 29891814 PCT