Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g00964 ATGGGAAGAAAAGGGTTCGAGTTCATGAACATGAGCATGGTTGTAGCAGTTGAAATAACGTTGGTACAATGTTTATGCATGTGGTGGTGCAGCACTGGAAGCAAGGTGCCTGCGATAATAGTGTTCGGAGACTCGTCGGTGGACTCAGGGAACAACAACTTCATTCCAACGATGGCGAGGAGCAACTTTGCGCCCTATGGAAGGGACTTCATGGGAGGAAACCCTACTGGGCGGTTCTCCAATGGACGCATCGCACCTGATTACATCTCTGAGGCATTTGGACTGAAGAAAGCTATTCCTGCTTACTTGGATCCAGCTTATAACATATCGGATTTCGCCACTGGGGTCTGCTTTGCTTCTGCTGGAACTGGATTCGATAATGCTACTGCTAAAGTTGCTGACGTGATACCTCTATGGAAAGAAGTTGAGTACTACAAGGAGTACCAAGAGAAACTTAGGTCATATCTTGGTGATGAAAAGGCCAATGAAAGATTAAGAGAGGCATTGTATTTGGTCAGCATTGGAACCAACGACTTTCTTGAGAACTACTACGTGCTGCCTGAACGAAGGTGTGAGTTCAAAACTGTTGAAGAATACGAGGACTTCCTCATTGGACTTGCTGAAAACTTCTTTAAGGAAATTTATGGCCTCGGGGCAAGGAAAATTTCCCTCACAGGGTTGCCTCCTATGGGGTGTCTCCCACTTGAGAGAGCAATTAACGTTTTGGAGTACCATGATTGTGTTGAATGGTACAATAATGTGGCTTTGGAGTTCAATGGAAAGTTGGGGTGGTTAGTCACTAAGCTCAACAAGGACCTCCCTGGCCTTCAATTGGTGGATGCAAATGCATATGATATCATGTTGCAAATCATTACCCAACCTTCTCGTTTTGGTTTTGAAGTGGCAGGAAGGGGATGCTGTGGAACAGGGAGATTTGAGATGGGCTTCATGTGCGATCCAAAAAGCCCATTTACATGCAAAGATGCAAATAAGTATGTATTTTGGGATGCCTTCCACCCATCAGCAAAAACAAGTGAAATAATCTCAAATTATTTAATTGAAAAATATTTAGCTAAGTTTCGTTGA 1086 0.4383 MGRKGFEFMNMSMVVAVEITLVQCLCMWWCSTGSKVPAIIVFGDSSVDSGNNNFIPTMARSNFAPYGRDFMGGNPTGRFSNGRIAPDYISEAFGLKKAIPAYLDPAYNISDFATGVCFASAGTGFDNATAKVADVIPLWKEVEYYKEYQEKLRSYLGDEKANERLREALYLVSIGTNDFLENYYVLPERRCEFKTVEEYEDFLIGLAENFFKEIYGLGARKISLTGLPPMGCLPLERAINVLEYHDCVEWYNNVALEFNGKLGWLVTKLNKDLPGLQLVDANAYDIMLQIITQPSRFGFEVAGRGCCGTGRFEMGFMCDPKSPFTCKDANKYVFWDAFHPSAKTSEIISNYLIEKYLAKFR 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g00964 361 CDD SGNH_plant_lipase_like 37 356 IPR035669 -
Cca09g00964 361 Pfam GDSL-like Lipase/Acylhydrolase 39 352 IPR001087 GO:0016788
Cca09g00964 361 SUPERFAMILY SGNH hydrolase 39 356 - -
Cca09g00964 361 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 14 360 - -
Cca09g00964 361 Gene3D SGNH hydrolase 29 358 IPR036514 -
Cca09g00964 361 PANTHER GDSL ESTERASE/LIPASE EXL3 14 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g00964 Cca-Chr9 28708903 28712705 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g00964 18 354 Pollen Coat Proteome AT1G75910 35.860 2.25e-63 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g00964 - - gmx:100778745 595.89