Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g00952 ATGGGTGCTGAAAATGGAGATTTCTCCATAAGTGTGACGAACGAAGAAGTGGTGGCAGCAATGGTGCCAATGCAAGAACATTGGCTACCACTTTCAAACCTTGACCTCCTTCTACCTCAAGTGGATGTTGGAGTCTTCTTTTGCTACAAGAACCCCAAGCTCAATGACACTAACAAAATAATGAGCTTTGGATCCATGGTGGGGTCTCTGAAAAAAGCCCTAGCACAAGTCCTAATCTCTTACTATGTGTTTGCAGGTGAAGTGGTGGCCAACAATATGGGTGAACCTGAGGTGCATTGTAACAATCGTGGGGTTGATTTTGTTGAAGCTGTGGCAGATGTTGAACTCAAATGCCTCAACTTTTACAACCCAGATGACACCATTGAAGGCAAGTTTGTTCCAAAGAAGAAGAATGGTGTGCTTGCTGTCCAGGCAACTTCACTCAAGTGTGGTGGAATAATAGTGGCATGCACATTTGACCATCGCATAGCCGATGCCTACTCAACAAACATGTTCCTCGTATCATGGGCCGAGACGGCTCAGCCCAACAAGCCCAAAACCGCCACCGTCGCCGCCGCTTCCCGCCACCCATGTTTCCGCCGCTCCCTTCTCAGCCCTCGCCGCCCAGGTTCCATCCACCCTTCCCTCCGCCACATGTACACCCCCATCTCCGAGCTCcctcctcctccggccacctccgccgccgccgccaccctcctcagccgcATATACTACGTCACGGCGGAGCAGCTCCGCCGCATGCAGTCCCTCGCCGCCACGCGCTCAAAGCTGGAGTGCTTCTCCGCATTCTTGTGGAAGATGGTGGCACGTGCGGCTTCACGAGACAAAGCCACCGAACGCGTTGTGGCGAAACTTGGCATCGTGGTTGATGGAAGGAAGAGACTTGGCAACGATGATGACAAAGAGAGAGAAGCCATGATGGACTCTTACTTTGGGAACGTGCTTTCCATACCCTTTGGCGGGAAACCTGTGGAGGAGTTGTTGGAGGAGCCGCTAGGGTTGGTGGCGGACGCCGTTCACGAGTTTTTGGCGGCCGCCGCCACCAAGGAGCACTTCTTAGGACTAATTGATTGGGTGGAGGCCCATCGACCGGTCCCTGGAGTGGCTACAATTTATTGTAGTCACAATGAGGGACCGGCTTTTGTGGTGTCCTCTGGTCAGAGGTTTCCAGAGGACATGATGGATTTTGGTTGGGGGAAGGTTGTGTTTGCATCATACCATTTTCCTTGGGGTGGTGAAGCTGGCTATGTTATGCCCATGCCAAGTCCTTTGGGGAATGGTGATTGGGTTGTGTACATGCACCTTGCAAAGAGGCAGTTGGAGATCATAGAGTCTGAGGCGGTTCATGTGTTTAGGCCCTTAACTTGGGATTACCTTAACCAATAA 1407 0.4968 MGAENGDFSISVTNEEVVAAMVPMQEHWLPLSNLDLLLPQVDVGVFFCYKNPKLNDTNKIMSFGSMVGSLKKALAQVLISYYVFAGEVVANNMGEPEVHCNNRGVDFVEAVADVELKCLNFYNPDDTIEGKFVPKKKNGVLAVQATSLKCGGIIVACTFDHRIADAYSTNMFLVSWAETAQPNKPKTATVAAASRHPCFRRSLLSPRRPGSIHPSLRHMYTPISELPPPPATSAAAATLLSRIYYVTAEQLRRMQSLAATRSKLECFSAFLWKMVARAASRDKATERVVAKLGIVVDGRKRLGNDDDKEREAMMDSYFGNVLSIPFGGKPVEELLEEPLGLVADAVHEFLAAAATKEHFLGLIDWVEAHRPVPGVATIYCSHNEGPAFVVSSGQRFPEDMMDFGWGKVVFASYHFPWGGEAGYVMPMPSPLGNGDWVVYMHLAKRQLEIIESEAVHVFRPLTWDYLNQ 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g00952 468 Gene3D - 223 453 IPR023213 -
Cca09g00952 468 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 8 463 - -
Cca09g00952 468 Pfam Transferase family 9 454 - -
Cca09g00952 468 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 8 463 - -
Cca09g00952 468 Gene3D - 7 222 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g00952 Cca-Chr9 28190687 28204308 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g00952 10 451 Monolignol Biosynthesis Gene Families AT5G48930 25.641 4.50e-28 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g00952 - - gmx:100785067 759.214