Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g00943 ATGGGTTTGCCATCAGAAGATATTGCTGAATATGCTCAGGTTCTGACATACAGCTTGGAGAAGAGGATCATCCCTAGATTTTCAGTTATTAAAATCTTGCAATCAAAAGTTGTCATGGGCCAGTATGTTAACCCATTGAATCCCAAGGTTGATGCTGACCAAATAAGGCCAACCACTCTCTTGTGTGTGAAATACAAGGCAAACTTGATGCTAATGTTGAAACTGTACCGTGAGGGTCTCCCACAGACCAACCAAAGCAGGTCGGCAAAATGTCGATCTGACATGCTTTTCGGCGATGGTCTCCAACATCGGAACAGAAACTATTGGCTCTATGTATATATGTTGGTTATGCTTCAGAGTTTGGAGCTTGACGGCAACAACGACGACAGCGGTGAAGGCACCTTTAAGGGTTTGAAGAAGCTAGCATCGTTCACGAAGATCCCCAAATCCCTAACAATTCTTCCTAGTGACTTGATTTTGACAACGACAACAAACCTTGACTTCGACAACAATTATGATGTTGACACTAACAACTTTGTAACACTCCTCGCCATTGTTCTCGACTTAGAGCACTGCATGAAGCTACTAGCAAAGGTGGGTGCGAATCTGCACAACTATGATCGGAGTAACGGCTTCGCGACGTTACACATGAGTATAGGTACATGTGGCAAATTTGCTTTTAGATCTTGGCTCAGATTCGTTAGACAGCCTCGACTTGGAGCACTCCATGAAGCTGCTAGCAAAGGCTGGTGCAAATTTGCACCACCACAAACGGAGCGACAACCTCACAGTCATGATGACTAG 804 0.4453 MGLPSEDIAEYAQVLTYSLEKRIIPRFSVIKILQSKVVMGQYVNPLNPKVDADQIRPTTLLCVKYKANLMLMLKLYREGLPQTNQSRSAKCRSDMLFGDGLQHRNRNYWLYVYMLVMLQSLELDGNNDDSGEGTFKGLKKLASFTKIPKSLTILPSDLILTTTTNLDFDNNYDVDTNNFVTLLAIVLDLEHCMKLLAKVGANLHNYDRSNGFATLHMSIGTCGKFAFRSWLRFVRQPRLGALHEAASKGWCKFAPPQTERQPHSHDD 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g00943 267 Gene3D Transcription termination factor 3, mitochondrial 1 52 IPR038538 -
Cca09g00943 267 Pfam mTERF 1 39 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g00943 Cca-Chr9 28015912 28019525 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Cca09g00943 mTERF 1e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g00943 K15032 - gmx:102670177 62.3882