Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g00913 ATGGGTAAGAATTGTTTAGTTGGCCTTGAGTCTCTAGTGCTGCAAGTGACATCTCTCCTTGGACAAGGCTCTGAAGAAGGAAATCTTGTTATACTCAGCCTGCCTGAAAGTTGCCTTAAGTCATTCAAATCACTCAAGGTGTTTGAGTCATTGAGCTCACTAGATTTTGAAGGCTGCAAGTTCTTAACTGAACTGCCTAGCTTATCTGGAATACCAAATTTGACGGCAGTATCTCTTAATAACTGCACTGATTTAATTAGAATTCATAGTTCAGTTGGATTTCTTGATAAACTTAAGTTATTGAGTGCTCAAGGATGCACCCAGCTAGAAATTTTGGTACCATGCATCTACCTGACATCTCTAGAGACTCTAGATCTGAGGGATTGCTCACGTCTTAGGAGATTCCCAGAAGTGTTGAGAATGATGGAGAATATAAGAGAGGTTTACCTGGATCATACTAATATAGATGAACTGCCATTTTCGATTGGAAATTTTGTTGGGCTTCGACAATTGTTCTTGAGGGATTGCCAAAGGCTGAACCAGCTACCAAGTACTATCCATATATTGCCACAACTTGAGATAGTTACGGCTTATGGTTGTGGTTGTAGGGGATATAGATTTAGATTACCTGAAGAAGAAGTAGAAAAAGTGGCCATGTGGCTTGAGATTTCGAATTTATGTTTTCTAGGGACTTTTATAGGCAGGTAA 708 0.3955 MGKNCLVGLESLVLQVTSLLGQGSEEGNLVILSLPESCLKSFKSLKVFESLSSLDFEGCKFLTELPSLSGIPNLTAVSLNNCTDLIRIHSSVGFLDKLKLLSAQGCTQLEILVPCIYLTSLETLDLRDCSRLRRFPEVLRMMENIREVYLDHTNIDELPFSIGNFVGLRQLFLRDCQRLNQLPSTIHILPQLEIVTAYGCGCRGYRFRLPEEEVEKVAMWLEISNLCFLGTFIGR 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g00913 235 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 34 207 IPR044974 GO:0006952
Cca09g00913 235 Gene3D Ribonuclease Inhibitor 3 116 IPR032675 -
Cca09g00913 235 SUPERFAMILY L domain-like 9 204 - -
Cca09g00913 235 Gene3D Ribonuclease Inhibitor 117 232 IPR032675 -
Cca09g00913 235 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 34 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g00913 Cca-Chr9 26809156 26810125 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g00913 28 200 WRKY Transcription Factor Family AT4G12020 36.813 8.96e-23 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g00913 - - ccaj:109804963 423.32