Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g00902 ATGCTCACCGGAGAACTCTCCACGCTCCTCAATGTTTTCCCTCTCCAAGAACTCCACATAAGCGACCAGATCAAGCACGAGATCGTTCCCAATCAAGCGCATCTCTCTTTGATTTTCGACAAACTAGAGATTCGCAATGCGTCCAGCTGTAGAGCGGAGATTGAGAGCCTGGAGGAAGAGATTATCAATCGGAGCGAGGAACAATCCAAAATGGACCTCATCACGTTGATCGGCATCGTTCGTTTCGCCAAGTGCATCCTCTTCGACGCGTCAACGCCGTCGCCGAGAGCCGCCGTTCTGCAGCGGAACCAGTCGTCGGAGTTAACGATTCCGACAGATTATTGGAAGGCGGCGACGCTATTGAGGATTTTGCGGCGGGGCTGGATGCCGGAGAGAGTGAGGGATTCTCAACTACCACCATGGTTCCACTTAATGTATGTGAGTGGTTCAAAGATTACCAACCGGTTTCAACAGGGAAACAAGAGATTGAGCATGCATATGACTTCAAGATGGATAATGTTTGTTGAGTATTGGGTTCCTGTACAAATATCTAATGTGCAGCTCGAGCAGTATTATGATATTTTGCTTTCCAATGCTTCAATTCTTCGCTCATCATCAAAGGTTGATAGTGGGGAGGCTGTTCGAGATGTTCTTATTTCAATTCGAAAGGCCATGGAGCTGTCTGGAACACTGCAAAAGTGGAGTCAGGGTCAATTGTCGCTGTTTTTGGCCTTGGAACTGTTGGGCTTGCTGTTGCTGAGGGTGCAAAAGCTGCTGGTGCATCCCGGATTATTGGCATAG 801 0.4844 MLTGELSTLLNVFPLQELHISDQIKHEIVPNQAHLSLIFDKLEIRNASSCRAEIESLEEEIINRSEEQSKMDLITLIGIVRFAKCILFDASTPSPRAAVLQRNQSSELTIPTDYWKAATLLRILRRGWMPERVRDSQLPPWFHLMYVSGSKITNRFQQGNKRLSMHMTSRWIMFVEYWVPVQISNVQLEQYYDILLSNASILRSSSKVDSGEAVRDVLISIRKAMELSGTLQKWSQGQLSLFLALELLGLLLLRVQKLLVHPGLLA 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g00902 266 PANTHER U BOX DOMAIN-CONTAINING 19 114 - -
Cca09g00902 266 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 16 19 114 - -
Cca09g00902 266 Coils Coil 47 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g00902 Cca-Chr9 26395101 26398597 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g00902 2 120 U-box Gene Family AT5G01830 30.769 3.50e-16 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g00902 - - ccaj:109795803 348.591