Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g00887 ATGGAGAGGTTAGGAGTAACGCATCTGACGGTGGTGCCGTCAGTGGTGGTGGTTGTGACGAAGGACGGCGTCACCGATGGGTACAGTTTTAAGTCGTTGGAATCCGTGGTGTGCGGTGGGGCTCCTCTGGGAAAGGAAACCGCTCATGCTTTCAACGCCAAGTGTGGAATTCAGGCAAAGCTAAGAGAGGTGGCATCTTTGGAGGGACATGTTCTTTTGAAAAAGCTAAGAGATGCATTAGAATCTTTAAGAGGTTGTTTTGCTGGAAGAAACAAAGAGGATGTGGAGAAAGCTATCTTTATGGTGGAAGCTTTGGCAGTTAAGTTGACTCAAAATGAGGGAGAATTGATTCAAGAGAAGTTTGAAGTGAAGAAGCTTGTAAACTTTCTCAAACAGGCTTCCGAAGATGCTAAAAAGTTGGTTAATCAAGAGAAGTCTTTTGCCTGTACCGAAATCCAAAGTGATAGGTCAGTGGTGCTGAGAATTGGGGAGGCACTTGAGGAACAAGAAAAAGCTTCCCAAGCTTCTAAACCACAAGACGTGGATGGACTAATAGAAGAGGTTCAAGAAGCTAGAAGAATCAAATTGTTGCATTAG 597 0.4439 MERLGVTHLTVVPSVVVVVTKDGVTDGYSFKSLESVVCGGAPLGKETAHAFNAKCGIQAKLREVASLEGHVLLKKLRDALESLRGCFAGRNKEDVEKAIFMVEALAVKLTQNEGELIQEKFEVKKLVNFLKQASEDAKKLVNQEKSFACTEIQSDRSVVLRIGEALEEQEKASQASKPQDVDGLIEEVQEARRIKLLH 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g00887 198 PANTHER STOMATAL CLOSURE-RELATED ACTIN-BINDING PROTEIN 3 52 198 - -
Cca09g00887 198 Pfam Coiled-coil regions of plant-specific actin-binding protein 64 198 IPR032009 -
Cca09g00887 198 Gene3D - 1 64 - -
Cca09g00887 198 SUPERFAMILY Acetyl-CoA synthetase-like 1 57 - -
Cca09g00887 198 Gene3D - 65 115 - -
Cca09g00887 198 PANTHER STOMATAL CLOSURE-RELATED ACTIN-BINDING PROTEIN 1 52 198 IPR039640 GO:0003779|GO:0007015|GO:0010119
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g00887 Cca-Chr9 25842255 25861973 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g00887 1 54 Monolignol Biosynthesis Gene Families AT5G63380 42.593 1.47e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g00887 - - ccaj:109811660 340.887