Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g00876 ATGGCAGACTGCTTGAAGCCACCTAGGCTATCTAGCACTGAAGATGACTCTGTGATACTGTTTTCAACATCTAATTCTCCTGAAGAGTCTAGTCCTTCTTCATCTTTCAACCATTCACCACCACCATCACTACATCAACACAAAACTGCATGCAAACTTTCAGTGAGAAATCTTTCCTACACTTTGCACCCTCATAAGGCCACTTCCTTTCCCTTTAGTCACCTGACTCAAAAACCAAAGCCTGTAAATATACTAAAGTCAGTCTCTTTTGTTGCCAGAAGTTCTGAGATTGTTTCTGTTGTTGGTCCTAGTGGCACAGGAAAGTCTACCCTTCTGCGAATCATCGCCGGAAGGGTAAAAAATGAAGATTTTGATCCTAAAAGCATCTCAATCAATGATCAGCCTATGACTAGTCCAGCTCAGTTGAGAAAGATATGTGGCTTTGTGGCACAAGAGGACAATTTGCTTCCTATGCTAACTGTGAAAGAAACTTTGTTGTTTAGTGCCAAGTTTAGGCTAAAGGAAATGGCACCAAAGGATAGAGAGTTGAGGGTAGAAAGCTTGTTGCAAGAGCTAGGCCTTTTTCATGTTGCAGATAGTTTTGTGGGGGATGAAGAGAATAGAGGGATATCAGGTGGAGAGAGGAAAAGGGTGTCTATTGGAGTTGATATGATTCACAATCCTCCGATTTTGCTCCTAGATGAGCCAACATCAGGTCTAGACAGCACTTCAGCTTTGCAAGTCATAGAGCTTCTGTCGTCAATTGTTAAAGCAAAGAAAAGGACAGTGGTTCTTTCAATCCACCAACCAAGCTATAGAATATTGCAGTATATTTCCAAGTTCTTGATCCTCTCACATGGTTCAGTTGTTCACAATGGTAGCCTAGAACTGCTAGAGGAAACCATAACTAAATTGGGATTTCAAATTCCTAAACAACTGAATGCGTTAGAATTCTCCATGGAAATCATACGCGGGTTGGAAGATTCCAGCTCCAAATATGACACATGCACCATTGAGGAAAAGGAGTCATTTCCAAACCTCATGTGGCCAGAGGAAGAAAACTGTGGAGTCCAAACACATTGTAACAAGGAAAGTCTTGGCAGTCTTTGTTATACAAACTTGATAGAGATATTGTTTCTGTGCTCAAGATTTTGGAAGATCATCTATAGAACAAAGCAGCTTTTCTTGGCTAGAACAATGCAAGCACTAGTTGGTGGCTTCGGGCTAGGAAGTGTATACGTTAAGGTAAGAAGAGATGAAGGAGGAGTTGCAGAAAGGTTAGGTCTATTTGCATTTAGCCTTAGTTTTCTCCTCTCTTCTACAGTTGAAGCACTTCCAATATACCTTCAAGAGAGGAGCGTTCTGATGAAAGAAGCCTCAAGGGGAGCCTATAGGATTTCCTCTTACATGATAGCCAACACTTTTGTCTTCCTTCCTTTCTTGTTTGTGGTATCTATACTTTTTGCTGTTCCTGTGTATTGGCTTGTAGGACTCAATCCTTCCCTTTCTGCCTTCACCTTCTTCACTTTTGTGGTGTGGCTCATTGTGCTCATGGCAAGTTCTCTAGTGCTCTTCTTAAGTGCAGTCTCTCCTGATTTCATTTCAGGGAACTCACTCATTTGCACAGTGCTTGGAGCCTTCTTCCTCTTCTCTGGATACTTCATCCCAAAGGAGAGCATCCCAAAGTATTGGCTTTTCATGTACTATGTGTCTCTCTATAGGTACCCTTTGGATGCACTCCTCACAAATGAGTACTGGAATGTTAGAAATGAGTGCTTCTCACATCAAATGGAGGGGTCACAGTGTTTGATTACTGGGTTTGATGTGTTGAAGAGTAGAGGACTTGAAAGGGATAACAGGTGGATGAATGTGGGAATAATGCTAGGATTCTTTGTCTTGTATCGTGTGCTTTGTTGGATAATACTTGCACGAAAGGCTTCCAAGACAACAATATAA 1956 0.4162 MADCLKPPRLSSTEDDSVILFSTSNSPEESSPSSSFNHSPPPSLHQHKTACKLSVRNLSYTLHPHKATSFPFSHLTQKPKPVNILKSVSFVARSSEIVSVVGPSGTGKSTLLRIIAGRVKNEDFDPKSISINDQPMTSPAQLRKICGFVAQEDNLLPMLTVKETLLFSAKFRLKEMAPKDRELRVESLLQELGLFHVADSFVGDEENRGISGGERKRVSIGVDMIHNPPILLLDEPTSGLDSTSALQVIELLSSIVKAKKRTVVLSIHQPSYRILQYISKFLILSHGSVVHNGSLELLEETITKLGFQIPKQLNALEFSMEIIRGLEDSSSKYDTCTIEEKESFPNLMWPEEENCGVQTHCNKESLGSLCYTNLIEILFLCSRFWKIIYRTKQLFLARTMQALVGGFGLGSVYVKVRRDEGGVAERLGLFAFSLSFLLSSTVEALPIYLQERSVLMKEASRGAYRISSYMIANTFVFLPFLFVVSILFAVPVYWLVGLNPSLSAFTFFTFVVWLIVLMASSLVLFLSAVSPDFISGNSLICTVLGAFFLFSGYFIPKESIPKYWLFMYYVSLYRYPLDALLTNEYWNVRNECFSHQMEGSQCLITGFDVLKSRGLERDNRWMNVGIMLGFFVLYRVLCWIILARKASKTTI 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g00876 651 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 70 311 IPR003439 GO:0005524
Cca09g00876 651 Gene3D - 71 320 IPR027417 -
Cca09g00876 651 ProSitePatterns ABC transporters family signature. 210 224 IPR017871 GO:0005524
Cca09g00876 651 Pfam ABC-2 type transporter 377 585 IPR013525 GO:0016020|GO:0140359
Cca09g00876 651 PANTHER ABC TRANSPORTER G FAMILY MEMBER 23 3 644 - -
Cca09g00876 651 MobiDBLite consensus disorder prediction 1 48 - -
Cca09g00876 651 SMART AAA_5 94 296 IPR003593 -
Cca09g00876 651 Pfam ABC-2 type transporter 268 334 IPR043926 GO:0140359
Cca09g00876 651 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 72 300 IPR027417 -
Cca09g00876 651 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 3 644 - -
Cca09g00876 651 MobiDBLite consensus disorder prediction 15 48 - -
Cca09g00876 651 Pfam ABC transporter 85 238 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g00876 Cca-Chr9 25633948 25636155 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g00876 82 298 Calmodulin-binding Proteins AT2G36910 28.634 1.12e-12 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g00876 K05681 - gmx:100783883 1142.87