Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g00863 ATGGTAGATGCCTCTTTAGGTGAAATAATGACAACATGTGAGAAGATAAATTGGCTACTATCAGAGGGTGAGAAGTGGCTAAAGCCTGAGTATAGATCCTCTGGAAGAGCAATGCTTCATAAAAGAGCCAGAGTAGAATTTCACCCTCTGGGTGTTATCGGTGCCATTGTGTCATGGAACTATCCTTTCCACAATATTTTTAATCCTATGTTGGCAGTAGTTTTTTCTGGAAATGGCATTGTGATTAAGATTTCAGAAAATGCAAGTTGGTCTGGGCCAAAGCTGATTGTTGCTAGAGCTAGTGCTTATGCGCGCCTATATGATTATGAACGTGTACGCAAGGTTTGCGATAAGCAGAAAGCTGTATTATTGGCAGATATGGCACACATCAGTGGATTGGTCGCAACTGAGAAAATTTGTTCCTTATTCAACTCGTGTGATTCATGTAGCCAACCTCATTTATTAAGATAA 471 0.4013 MVDASLGEIMTTCEKINWLLSEGEKWLKPEYRSSGRAMLHKRARVEFHPLGVIGAIVSWNYPFHNIFNPMLAVVFSGNGIVIKISENASWSGPKLIVARASAYARLYDYERVRKVCDKQKAVLLADMAHISGLVATEKICSLFNSCDSCSQPHLLR 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g00863 156 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 3 92 IPR016162 GO:0016491
Cca09g00863 156 SUPERFAMILY PLP-dependent transferases 83 147 IPR015424 -
Cca09g00863 156 PANTHER ALDEHYDE DEHYDROGENASE-LIKE PROTEIN YHR039C-RELATED 1 93 - -
Cca09g00863 156 Pfam Serine hydroxymethyltransferase 83 148 IPR039429 -
Cca09g00863 156 Pfam Aldehyde dehydrogenase family 5 96 IPR015590 GO:0016491
Cca09g00863 156 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 1 93 - -
Cca09g00863 156 SUPERFAMILY ALDH-like 3 93 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g00863 Cca-Chr9 25370926 25372437 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g00863 1 92 Aldehyde Dehydrogenase Gene Family AT3G66658 90.217 2.18e-55 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g00863 - - ccaj:114915164 193.741