Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g00856 ATGACTTTTGATGCATTCCTTCTCAGAGAACTTGGTGTTGCCCTTCTCATCTTCTTCATCTCACACTTCTCCATTAGATTAATCATAAAAAATTCTAGAAACCTTCCACCAGGCCCAAGAGGATGGCCAATTCTTGGTGCCCTACCACTTTTGGGTACCATGCCTCATGTCACACTCACAAACATGGCCAAGAAATTTGGACCCATCATGTTCCTCAAAATGGGCACTTGTGACACTGTGGTTGTCTCAAGCCCAGATGCTGCCCAAGCATTCCTCAAGACCTTGGATCACAATTTCCTAAACAGGCCCACAATTGCTGGGGCAACCCACTTGGGGTACAATGGCCAAGACCTTGTTTTTGCAAATTATGGGCCTAAATGGAAGCTCCTTAGGAAACTAACCATTCAGCACATGCTTGGTGGGAAGGCCCTTGGTGATTGGGCCCATGTGAGAACAAGTGAGGTGAAACACATGGTAAGAGCCATGCATGAGTGTGCCAAACAAGGGGAACTTGTAGAGCTGGGTGATTTGTTGAGTTGTGCAATTACTAATATGGTGAGCCAAGTGGTGCTTAGCCAACGCATATTTTCAAATAAAGGGTTTGAGTCTAAGGAGTTTAAGGACATGGTGGTGGAATTCATGACAATTTCTGGGGTGAATATTGGTGATTTTGTACCTTGCATTGCTTGGATGGACTTACAAGGTGTGGTGGGTAAGATGAAAAGGTTGCATAAGAGGTTTGATGTGTTCTTAACAAAAATTATTGAAGAGCATGTAAAGTCTTCTCATGAACGAAAGGAGAAGCCAGATTTTCTTGATATTGTGATGTCAAATGGAGAGAATCCTTCCCAAGAGGGATTGACTTTGTCCAACATCAAGGCTCTATTATTGAATTTGTTCACTGCAGGCACAGACACATCATCTAGCATCATAGAATGGGCAATGGCTGAAATGTTGAAAAACCCCATCATCTTGACAAGGGCACAGAAAGAGATGGATCAAGTGATAGGCAGACAAAGACTACTTGCTGAATCTGACCTACCAAATTTACCATACCTTCAAGCAATCTGCAAGGAGACATATAGGATGCACCCATCTACACCCCTTGGTGTCCCCAGGGTGGCAAATGAAGCATGCCAAGTTAATGGATTCTACATCCCCAAGAACACTAGATTAAATGTGAACATATGGGCCATAGGGAGAGACCCCAATGTGTGGTCCAACCCACTAGAGTTCAATCCAGAGAGGTTTCTTAGAGGGAAGAGTGCAAAAATTGATCCAAGTGGAGTTGATTTTGAGTTGATGCCCTTTGGAGCTGGAAGAAGGATTTGTGTAGGGTATAGAATGGCCATTGGGGTTGTTGAGTACATTTTGGGCATTTTGGTGCATTCTTTTGACTGGAAGTTACCAAATGGGGTAGAACTAAACATGGATGAGGCCTTTGGACTCACTTTGCAAAAGGCAGTGCCTCTGTCAGCCGTGGTTAGCCCTCGGTTGGTCTCAGATGCTTATGAACATGTTTGA 1524 0.4396 MTFDAFLLRELGVALLIFFISHFSIRLIIKNSRNLPPGPRGWPILGALPLLGTMPHVTLTNMAKKFGPIMFLKMGTCDTVVVSSPDAAQAFLKTLDHNFLNRPTIAGATHLGYNGQDLVFANYGPKWKLLRKLTIQHMLGGKALGDWAHVRTSEVKHMVRAMHECAKQGELVELGDLLSCAITNMVSQVVLSQRIFSNKGFESKEFKDMVVEFMTISGVNIGDFVPCIAWMDLQGVVGKMKRLHKRFDVFLTKIIEEHVKSSHERKEKPDFLDIVMSNGENPSQEGLTLSNIKALLLNLFTAGTDTSSSIIEWAMAEMLKNPIILTRAQKEMDQVIGRQRLLAESDLPNLPYLQAICKETYRMHPSTPLGVPRVANEACQVNGFYIPKNTRLNVNIWAIGRDPNVWSNPLEFNPERFLRGKSAKIDPSGVDFELMPFGAGRRICVGYRMAIGVVEYILGILVHSFDWKLPNGVELNMDEAFGLTLQKAVPLSAVVSPRLVSDAYEHV 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g00856 507 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g00856 507 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g00856 507 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g00856 507 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g00856 507 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g00856 507 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g00856 507 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g00856 507 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g00856 507 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g00856 507 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g00856 507 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g00856 507 PRINTS P450 superfamily signature 444 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g00856 507 Pfam Cytochrome P450 36 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g00856 507 Gene3D Cytochrome P450 25 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g00856 507 SUPERFAMILY Cytochrome P450 36 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g00856 507 PANTHER CYTOCHROME P450 71B11-RELATED 9 497 - -
Cca09g00856 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Cca09g00856 507 PANTHER FLAVONOID 3'-MONOOXYGENASE 9 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g00856 Cca-Chr9 25224405 25231819 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g00856 5 504 Cytochrome P450 AT5G07990 46.955 1.17e-169 487
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g00856 K13083 - qsu:112039568 737.258