Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g00852 ATGGGTGATGATGGTTTAGGGTTTGGAGACGCTCCCGGAGGAGTTTTCCCGAGACATGGTGGTTTTGTCGTGAGTTCGTTGCTGAAGGCTGTGATGGCTAGTGACATTGCGATTGCCCAGTTTCGATTTTTAGAGAGGCTTCTAGTTGTCCATGGACATTGGTGTTACAAGAGGATTGCACAAATGATATGTTATTTATTCTACAAGAATATTGCATTTGGCCTCACCATATTCTATTTTGAGGCCTTCACAGGCTTCTCTGGTCAATCGGTTTATTACGACTGGTACATGATTTTGTTCAATGTTGTTTTGACATCATTACCCGTTATTTCCCTTGGTGTTTTTGAACAAGATGTTCCATCAGAATTTCCAGCACTGTATCAACAAGGACCCAAGAATTTGTTCTTTGACTGGTACAAAATTTTGGGATGGATGGGAAATGGTCTCTATGCCTCTCTCATCATCTTCTTCCTTATCCTCACCATCTTCTATGACCAATCATTCCGGCCAGACAGCCGACATGGCTGCTGTTGGGAGAATAATGCAACATGA 552 0.4257 MGDDGLGFGDAPGGVFPRHGGFVVSSLLKAVMASDIAIAQFRFLERLLVVHGHWCYKRIAQMICYLFYKNIAFGLTIFYFEAFTGFSGQSVYYDWYMILFNVVLTSLPVISLGVFEQDVPSEFPALYQQGPKNLFFDWYKILGWMGNGLYASLIIFFLILTIFYDQSFRPDSRHGCCWENNAT 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g00852 183 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 28 172 - -
Cca09g00852 183 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 28 172 - -
Cca09g00852 183 SUPERFAMILY Calcium ATPase, transmembrane domain M 52 169 IPR023298 -
Cca09g00852 183 Pfam Phospholipid-translocating P-type ATPase C-terminal 31 169 IPR032630 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g00852 Cca-Chr9 25125242 25131661 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g00852 28 171 Primary Pumps ATPases AT1G54280 81.081 5.41e-79 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g00852 K01530 - gmx:100819559 271.552