Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g00850 ATGAGGTGCTGGAAGCTGAGATGGCAGATCTTGGTGATATTAGTTGACCAACAGGACTTCTGGGATGAAACTGATAGGATTGGAAGTCATAGTGAAAAGGCTGTGATGGCTAGTGACTTTGCGATTGCCCAGTTTCGATTTTTAGAGAGGCTTCTGGTTGTCCATGGACATTGGTGTTACAAGAGGATTGCACAAATGATATGTTACTTCTTCTACAAGAATATTGCATTTGGCCTCACCATATTCTATTTTGAGGCCTTCACAGGCTTCTCTGGTCAATCGGTTTAG 288 0.4271 MRCWKLRWQILVILVDQQDFWDETDRIGSHSEKAVMASDFAIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTIFYFEAFTGFSGQSV 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g00850 95 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 30 95 - -
Cca09g00850 95 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 30 95 - -
Cca09g00850 95 Pfam Phospholipid-translocating P-type ATPase C-terminal 35 95 IPR032630 -
Cca09g00850 95 SUPERFAMILY Calcium ATPase, transmembrane domain M 56 91 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g00850 Cca-Chr9 25070603 25072837 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g00850 28 95 Primary Pumps ATPases AT1G72700 89.706 2.70e-39 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g00850 K01530 - twl:120002090 132.494