Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g00835 ATGGTTAGGGTTTGGAACTCATGGTGGGTTTTTGTTTCTGTGCTGCTTTTGTTCCATGTCACCTCTTCGCATTTCATCGTCAAGAATTTACCAGGTTTTGGGGATCTTCCATTCACATTGAATACTGGATACATTGGTGTGGGAGAAAGAGAAGAAGTGCAGCTATATTATTACTTTGTTGAATCTCAAAGGAGTCCCTTGAATGACCCTTTTCTTCTTTGGCTCGTTGGAGGTCCAGGTTGCTCTGCACATTCTGCTTTCTTCTATGAAAATGGGCCATTAATTTTTAATTATGAGGATTTTAATGGGAGCTCTCCAACACTTCTATTGAATCCGAACACTTGGACAAAGGTACTCAACATATTATATGTCGATGCACCCGTTGGAACGGGATACTCTTACTCAAAAACACAAGAAGGCTATTATAGCAATGACAAGCAATTGGTGGAACACATCTATGATTTTCTCCAAAAGTGGCAGGTGGATTACCCTGAATTCAGATCGAACCCCTTTTACATTGGTGGTGGTTCTTATTCAGGCAAAGTTGTTCTTCCCCTTGCTCACAAAATATACGAAGATTATAAAGCAGGACGCTCACCAATCCTGAACTTCCAAGGCTTTGTGCTTTCAAGTCCAAGCATCGACACTTTCCTGGACAATAACACAAAAGTTGAATTTGCTCACCAACGGACACTTATATCGGATGAATTGTATGAGTCAATTAAATCTAATTGCAATGGTGATTATGTCAATCTTGATCCTAACAACAAAAATTGTATGTCAGATTATGAAGCCTACTATGAGTTAATTCGTTACATAGATGAATACCAAATTTTGCGACGAAGTTGCAAGCTTGCATCTAAGGAGAATCAAAGAATTCTTTCCGAAGAGTTTAAAAATATCCGCCAAACCAAATTTAGGTGTCGGGATGACGAATACGCGGTTGGAGAATTATGGGCAAATGACCCACATGTTCTAAAGGCTCTTCGAGTTAGAGAGGGAACTAAAGAGGAGTTCCGAAGATGCAATCACAGTTCTGCATTTACATTGAACGTTCCTAGTGTCGTTGAATACCTTCAAAATCTTACAAACACAAACTTGCGATCTCTAATTTACTGCGCCGATCTTGACCTAGCGTTACCATATCTTAGTTCACTTTCTATTGTCAAGTCGCTCAAATTGAAATTGGATATGGCTTGGCATCCATGGTTCGTTGATGGTGAAGTGGCAGGATATGCAGAGGAACACAAGAAAAGTGAGTATTGTCTAACGTACGCCATTGTGAAGGGAGCGGGTCATGTGGCGCAAGAGACTAAGCCTAAGGAGGTATATGAAATGATTGATAGATGGTTGTCATTTTCAGATATATAA 1371 0.399 MVRVWNSWWVFVSVLLLFHVTSSHFIVKNLPGFGDLPFTLNTGYIGVGEREEVQLYYYFVESQRSPLNDPFLLWLVGGPGCSAHSAFFYENGPLIFNYEDFNGSSPTLLLNPNTWTKVLNILYVDAPVGTGYSYSKTQEGYYSNDKQLVEHIYDFLQKWQVDYPEFRSNPFYIGGGSYSGKVVLPLAHKIYEDYKAGRSPILNFQGFVLSSPSIDTFLDNNTKVEFAHQRTLISDELYESIKSNCNGDYVNLDPNNKNCMSDYEAYYELIRYIDEYQILRRSCKLASKENQRILSEEFKNIRQTKFRCRDDEYAVGELWANDPHVLKALRVREGTKEEFRRCNHSSAFTLNVPSVVEYLQNLTNTNLRSLIYCADLDLALPYLSSLSIVKSLKLKLDMAWHPWFVDGEVAGYAEEHKKSEYCLTYAIVKGAGHVAQETKPKEVYEMIDRWLSFSDI 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g00835 456 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 10-RELATED 11 453 - -
Cca09g00835 456 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 11 453 IPR001563 GO:0004185|GO:0006508
Cca09g00835 456 Pfam Serine carboxypeptidase 35 452 IPR001563 GO:0004185|GO:0006508
Cca09g00835 456 SUPERFAMILY alpha/beta-Hydrolases 27 452 IPR029058 -
Cca09g00835 456 PRINTS Carboxypeptidase C serine protease (S10) family signature 111 123 IPR001563 GO:0004185|GO:0006508
Cca09g00835 456 PRINTS Carboxypeptidase C serine protease (S10) family signature 124 134 IPR001563 GO:0004185|GO:0006508
Cca09g00835 456 PRINTS Carboxypeptidase C serine protease (S10) family signature 159 184 IPR001563 GO:0004185|GO:0006508
Cca09g00835 456 PRINTS Carboxypeptidase C serine protease (S10) family signature 423 436 IPR001563 GO:0004185|GO:0006508
Cca09g00835 456 Gene3D - 306 455 - -
Cca09g00835 456 Gene3D alpha/beta hydrolase 24 285 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g00835 Cca-Chr9 24694770 24712807 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g00835 314 452 Calmodulin-binding Proteins AT2G22960 34.532 3.78e-25 100