Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g00834 ATGGCTCACAGGCGTTGCCTCTTAATAAGAGGGAACCTCATGAATCGGAAGTGTCACCCATCTTTTAGTTATGTTCTCCACAGTGATGACTGGAGACGTGAATGCCCTGATGAAAAGTCACCTTCAGAAGGCATTAGTAATTCTAACCAAAGAAGGATGTTTGGGAACTCAGTTGATGGATCAATCTGGTTTGTTGCCTATTCTGGACATAGAATGCAATCAAACAGATTCCTTTCAGCGTACTCTGGATATAATTTCTGTCGACATATGTCAACAGTTAATCAGGGTTCTGATAAGATTGACATAATGACTGACATAGCAGATGTTCTCAAAGACACAACTGTGGAAGCTGTAACTTCTCAGGCTCCCATTGTCAAAGAAGTTGCAATTGCTGCTGCTGATTCTTTTTTACCTGTGAAGGCCTTGCAGTATATTATAGATGCTGTGCATTCCTACACTGGATTAAACTGGTGGGCAGCCATAGTTCTAACAACTCTCTTCATTCGGAGTGCAACAGTTCCACTCATAATAAATCAACTTAAGGCCACTTCTAAGCTTACACTAATGAGGCCGCACATGGAAAAGATAAAGCAAGAGATTGAAGATAAGGCTATGGATCCCGTAGCTGTTGCTGAAGGTCAGAAAAAAATGAAGAATCTGTTTAAGGAATATGGTACGAGTCCATTTACTCCATTGAAGGGACTCTTTATTCAAGGTCCGGTCTTTATCAGTTTTTTCCTTGCGATAAGAAACATGGCTGAAAAGATGCCATCTTTCAAGCATGGGGGAGCCTACTGGTTTGTTGATCTCACAACTCCAGATGCCTTGTACGTTTTGCCAGTTCTTACTGGATTGTCATTCTTAATAACAGTAGAGTGCAATATGCAAGAAGGCTTGGAGGGAAATCCTGTTGCTGGAACCATGAAAAAATTCTCTAGGGGTCTTGCAGTTCTTACAGTTCCTTTCACCATGGGATTTCCAAAGGCTATATTTTGTTACTGGATTACATCAAATTTGTTTTCACTTGTGTATGGACTTGTCCTTAAAGCTCCTGGTGTAAAGGAAGCTTTGGGCATTCCTAAACTACCCGATGCAGCACCCACCAGTGCTCCACAATCCCCCTTTTCTCTGTTTCCAGCACTGAAAAAAGCTAAATCAGCAACCAATGGACCAACCTCATTGCCAGTTGAACCATCAAAACATCCAAAGAAAAACACATCTTCTCCTGATGCCAGTCAAAGGCATAAAAAGACATCTTCTCCTGATGTCAGTCAAAGGCTTAAACGTTTAGagaaacaagtgaaaggaagaaagaaaaacaagaaCTGA 1329 0.4041 MAHRRCLLIRGNLMNRKCHPSFSYVLHSDDWRRECPDEKSPSEGISNSNQRRMFGNSVDGSIWFVAYSGHRMQSNRFLSAYSGYNFCRHMSTVNQGSDKIDIMTDIADVLKDTTVEAVTSQAPIVKEVAIAAADSFLPVKALQYIIDAVHSYTGLNWWAAIVLTTLFIRSATVPLIINQLKATSKLTLMRPHMEKIKQEIEDKAMDPVAVAEGQKKMKNLFKEYGTSPFTPLKGLFIQGPVFISFFLAIRNMAEKMPSFKHGGAYWFVDLTTPDALYVLPVLTGLSFLITVECNMQEGLEGNPVAGTMKKFSRGLAVLTVPFTMGFPKAIFCYWITSNLFSLVYGLVLKAPGVKEALGIPKLPDAAPTSAPQSPFSLFPALKKAKSATNGPTSLPVEPSKHPKKNTSSPDASQRHKKTSSPDVSQRLKRLEKQVKGRKKNKN 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g00834 442 MobiDBLite consensus disorder prediction 386 402 - -
Cca09g00834 442 PANTHER OXA1 79 415 IPR001708 GO:0016021|GO:0032977
Cca09g00834 442 Pfam 60Kd inner membrane protein 157 347 IPR001708 GO:0016021|GO:0032977
Cca09g00834 442 PANTHER MITOCHONDRIAL INNER MEMBRANE PROTEIN OXA1L 79 415 - -
Cca09g00834 442 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 156 347 IPR028055 -
Cca09g00834 442 MobiDBLite consensus disorder prediction 383 442 - -
Cca09g00834 442 MobiDBLite consensus disorder prediction 403 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g00834 Cca-Chr9 24662883 24678061 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g00834 137 352 Chloroplast and Mitochondria Gene Families AT2G28800 24.336 2.63e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g00834 K03217 - gmx:100787806 780.4